Malaria parasite detection with histogram color space method in Giemsa-stained blood cell images

Author(s):  
S Edy Victor Haryanto ◽  
M. Y. Mashor ◽  
A. S. Abdul Nasir ◽  
H. Jaafar
2018 ◽  
Author(s):  
Samir Bandyopadhyay ◽  
Sanjay Nag ◽  
Nabanita Basu

BACKGROUND Malaria has plagued tropical, developing countries over the last two centuries. Light Microscopy is the gold standard for malaria parasite detection. This research work is aimed to harness the potential of virtual microscopy and computer aided diagnosis systems to minimize human error and labour towards malaria parasite detection. OBJECTIVE The proposed method is tested on differently stained blood smear images for malaria parasite detection. METHODS Digitized thin blood smears have been used to predict the presence of malaria parasite using unsupervised and rule based methods. A dataset consisting of 1410 images (667 infected, 743 normal) was developed from the MaMic database. Cochrane’s sample size estimation was used to decide sample size. To widen the applicability of the algorithm beyond the dataset under consideration, illumination correction, database specific artefact removal was performed. Thereafter unsupervised k-means (k=3) clustering was performed to segregate the foreground components, the erythrocyte, malaria infection and white blood cells from the background. Clumps are identified based on the third quartile bound of the area distribution of the foreground components. The clumps consist of both, red blood cell clumps and mixed clumps consisting of both red and white blood cells. Clumps marked out were de-clumped automatically using modified watershed algorithm. The binary de-clumped mask was used to retrieve pixel colour information from the original image. The image colour in RGB colour space was down sampled by representing the same in YCbCr colour space. Based on the values in YCbCr colour space, the image was recoloured and pixel position matching was performed to detect malaria parasite. RESULTS As compared to Zack’s thresholding (63.75%), 3-means clustering (98.96%) had a higher accuracy at foreground particle identification. The third quartile mark was selected for clump/s identification while Tukey’s upper hinge showed higher strength towards white blood cell particle identification. The accuracy for malaria parasite detection by the proposed system was recorded as 98.11% (Sensitivity-0.9645, Specificity-1, AUC-0.9583) CONCLUSIONS The proposed work is particularly innovative as it uses two basic features, colour and area, to identify malaria parasite in thin blood smear image. The paper documents an automated robust algorithm to assist pathologists at Parasitaemia estimation as per World Health Organization standard.


2014 ◽  
Vol 2014 ◽  
pp. 1-9 ◽  
Author(s):  
Mu-Chun Su ◽  
Chun-Yen Cheng ◽  
Pa-Chun Wang

This paper presents a new white blood cell classification system for the recognition of five types of white blood cells. We propose a new segmentation algorithm for the segmentation of white blood cells from smear images. The core idea of the proposed segmentation algorithm is to find a discriminating region of white blood cells on the HSI color space. Pixels with color lying in the discriminating region described by an ellipsoidal region will be regarded as the nucleus and granule of cytoplasm of a white blood cell. Then, through a further morphological process, we can segment a white blood cell from a smear image. Three kinds of features (i.e., geometrical features, color features, and LDP-based texture features) are extracted from the segmented cell. These features are fed into three different kinds of neural networks to recognize the types of the white blood cells. To test the effectiveness of the proposed white blood cell classification system, a total of 450 white blood cells images were used. The highest overall correct recognition rate could reach 99.11% correct. Simulation results showed that the proposed white blood cell classification system was very competitive to some existing systems.


2017 ◽  
Vol 114 (16) ◽  
pp. 4225-4230 ◽  
Author(s):  
Marion Koch ◽  
Katherine E. Wright ◽  
Oliver Otto ◽  
Maik Herbig ◽  
Nichole D. Salinas ◽  
...  

Invasion of the red blood cell (RBC) by the Plasmodium parasite defines the start of malaria disease pathogenesis. To date, experimental investigations into invasion have focused predominantly on the role of parasite adhesins or signaling pathways and the identity of binding receptors on the red cell surface. A potential role for signaling pathways within the erythrocyte, which might alter red cell biophysical properties to facilitate invasion, has largely been ignored. The parasite erythrocyte-binding antigen 175 (EBA175), a protein required for entry in most parasite strains, plays a key role by binding to glycophorin A (GPA) on the red cell surface, although the function of this binding interaction is unknown. Here, using real-time deformability cytometry and flicker spectroscopy to define biophysical properties of the erythrocyte, we show that EBA175 binding to GPA leads to an increase in the cytoskeletal tension of the red cell and a reduction in the bending modulus of the cell’s membrane. We isolate the changes in the cytoskeleton and membrane and show that reduction in the bending modulus is directly correlated with parasite invasion efficiency. These data strongly imply that the malaria parasite primes the erythrocyte surface through its binding antigens, altering the biophysical nature of the target cell and thus reducing a critical energy barrier to invasion. This finding would constitute a major change in our concept of malaria parasite invasion, suggesting it is, in fact, a balance between parasite and host cell physical forces working together to facilitate entry.


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