Identification of subject-specific brain functional networks using a collaborative sparse nonnegative matrix decomposition method

Author(s):  
Hongming Li ◽  
Ted Satterthwaite ◽  
Yong Fan
2018 ◽  
Author(s):  
Mustafa S Salman ◽  
Yuhui Du ◽  
Dongdong Lin ◽  
Zening Fu ◽  
Eswar Damaraju ◽  
...  

AbstractBrain functional networks identified from fMRI data can provide potential biomarkers for brain disorders. Group independent component analysis (GICA) is popular for extracting brain functional networks from multiple subjects. In GICA, different strategies exist for reconstructing subject-specific networks from the group-level networks. However, it is unknown whether these strategies have different sensitivities to group differences and abilities in distinguishing patients. Among GICA, spatio-temporal regression (STR) and spatially constrained ICA approaches such as group information guided ICA (GIG-ICA) can be used to propagate components (indicating networks) to a new subject that is not included in the original subjects. In this study, based on the same a priori network maps, we reconstructed subject-specific networks using these two methods separately from resting-state fMRI data of 151 schizophrenia patients (SZs) and 163 healthy controls (HCs). We investigated group differences in the estimated functional networks and the functional network connectivity (FNC) obtained by each method. The networks were also used as features in a cross-validated support vector machine (SVM) for classifying SZs and HCs. We selected features using different strategies to provide a comprehensive comparison between the two methods. GIG-ICA generally showed greater sensitivity in statistical analysis and better classification performance (accuracy 76.45±8.9%, sensitivity 0.74±0.11, specificity 0.79±0.11) than STR (accuracy 67.45±8.13%, sensitivity 0.65±0.11, specificity 0.71±0.11). Importantly, results were also consistent when applied to an independent dataset including 82 HCs and 82 SZs. Our work suggests that the functional networks estimated by GIG-ICA are more sensitive to group differences, and GIG-ICA is promising for identifying image-derived biomarkers of brain disease.


NeuroImage ◽  
2012 ◽  
Vol 59 (4) ◽  
pp. 3889-3900 ◽  
Author(s):  
Aaron Alexander-Bloch ◽  
Renaud Lambiotte ◽  
Ben Roberts ◽  
Jay Giedd ◽  
Nitin Gogtay ◽  
...  

PLoS ONE ◽  
2013 ◽  
Vol 8 (12) ◽  
pp. e82715 ◽  
Author(s):  
Guihua Jiang ◽  
Xue Wen ◽  
Yingwei Qiu ◽  
Ruibin Zhang ◽  
Junjing Wang ◽  
...  

Author(s):  
Mariacarla Gonzalez ◽  
Razvigor Ossikovski ◽  
Tatiana Novikova ◽  
Jessica Ramella-Roman

2019 ◽  
Vol 29 (2) ◽  
pp. 1-4 ◽  
Author(s):  
Wei Zheng ◽  
Hongli Yu ◽  
Weiguo Ding ◽  
Lei Guo ◽  
Guizhi Xu ◽  
...  

2018 ◽  
Vol 8 (10) ◽  
pp. 579-594 ◽  
Author(s):  
Phebe Brenne Kemmer ◽  
Yikai Wang ◽  
F. DuBois Bowman ◽  
Helen Mayberg ◽  
Ying Guo

Neuron ◽  
2018 ◽  
Vol 100 (3) ◽  
pp. 728-738.e7 ◽  
Author(s):  
Jeffrey B. Wang ◽  
Muna Aryal ◽  
Qian Zhong ◽  
Daivik B. Vyas ◽  
Raag D. Airan

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