Alignment-free sequence comparison: A systematic survey from a machine learning perspective

2022 ◽  
pp. 1-1
Author(s):  
Katrin Sophie Bohnsack ◽  
Marika Kaden ◽  
Julia Abel ◽  
Thomas Villmann
Keyword(s):  
Machine Learning ◽  
Sequence Comparison ◽  
Systematic Survey ◽  
Alignment Free

Extraction of high quality k-words for alignment-free sequence comparison

2014 ◽  
Vol 358 ◽  
pp. 31-51 ◽  
Author(s):  
Upuli Gunasinghe ◽  
Damminda Alahakoon ◽  
Susan Bedingfield
Keyword(s):  
Sequence Comparison ◽  
High Quality ◽  
Alignment Free

Alignment-Free Z-Curve Genomic Cepstral Coefficients and Machine Learning for Classification of Viruses

2018 ◽  
pp. 290-301 ◽  
Author(s):  
Emmanuel Adetiba ◽  
Oludayo O. Olugbara ◽  
Tunmike B. Taiwo ◽  
Marion O. Adebiyi ◽  
Joke A. Badejo ◽  
...  
Keyword(s):  
Machine Learning ◽  
Alignment Free ◽  
Cepstral Coefficients ◽  
Z Curve

scholarly journals Benchmarking of alignment-free sequence comparison methods

2019 ◽  
Vol 20 (1) ◽  
Author(s):  
Andrzej Zielezinski ◽  
Hani Z. Girgis ◽  
Guillaume Bernard ◽  
Chris-Andre Leimeister ◽  
Kujin Tang ◽  
...  
Keyword(s):  
Sequence Comparison ◽  
Alignment Free ◽  
Comparison Methods

scholarly journals Towards the Deployment of Machine Learning Solutions in Network Traffic Classification: A Systematic Survey

2019 ◽  
Vol 21 (2) ◽  
pp. 1988-2014 ◽  
Author(s):  
Fannia Pacheco ◽  
Ernesto Exposito ◽  
Mathieu Gineste ◽  
Cedric Baudoin ◽  
Jose Aguilar
Keyword(s):  
Machine Learning ◽  
Network Traffic ◽  
Traffic Classification ◽  
Systematic Survey ◽  
Network Traffic Classification

Statistical considerations underpinning an alignment-free sequence comparison method

2010 ◽  
Vol 39 (3) ◽  
pp. 325-335
Author(s):  
Junmei Jing ◽  
Conrad J. Burden ◽  
Sylvain Forêt ◽  
Susan R. Wilson
Keyword(s):  
Sequence Comparison ◽  
Comparison Method ◽  
Alignment Free
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