scholarly journals Hierarchical spatial models for predicting pygmy rabbit distribution and relative abundance

2010 ◽  
Vol 47 (2) ◽  
pp. 401-409 ◽  
Author(s):  
Tammy L. Wilson ◽  
James B. Odei ◽  
Mevin B. Hooten ◽  
Thomas C. Edwards Jr
2016 ◽  
Vol 73 (7) ◽  
pp. 1725-1738 ◽  
Author(s):  
Yan Jiao ◽  
Rob O'Reilly ◽  
Eric Smith ◽  
Don Orth ◽  

Abstract In many marine fisheries assessments, population abundance indices from surveys collected by different states and agencies do not always agree with each other. This phenomenon is often due to the spatial synchrony/asynchrony. Those indices that are asynchronous may result in discrepancies in the assessment of temporal trends. In addition, commonly employed stock assessment models, such as the statistical catch-at-age (SCA) models, do not account for spatial synchrony/asynchrony associated with spatial autocorrelation, dispersal, and environmental noise. This limits the value of statistical inference on key parameters associated with population dynamics and management reference points. To address this problem, a set of geospatial analyses of relative abundance indices is proposed to model the indices from different surveys using spatial hierarchical Bayesian models. This approach allows better integration of different surveys with spatial synchrony and asynchrony. We used Atlantic weakfish (Cynoscion regalis) as an example for which there are state-wide surveys and expansive coastal surveys. We further compared the performance of the proposed spatially structured hierarchical Bayesian SCA models with a commonly used Bayesian SCA model that assumes relative abundance indices are spatially independent. Three spatial models developed to mimic different potential spatial patterns were compared. The random effect spatially structured hierarchical Bayesian model was found to be better than the commonly used SCA model and the other two spatial models. A simulation study was conducted to evaluate the uncertainty resulting from model selection and the robustness of the recommended model. The spatially structured hierarchical Bayesian model was shown to be able to integrate different survey indices with/without spatial synchrony. It is suggested as a useful tool when there are surveys with different spatial characteristics that need to be combined in a fisheries stock assessment.


2009 ◽  
Vol 3 (3) ◽  
pp. 1052-1079 ◽  
Author(s):  
Andrew O. Finley ◽  
Sudipto Banerjee ◽  
Ronald E. McRoberts

Author(s):  
N. Samba Kumar ◽  
K. Ullas Karanth ◽  
James D. Nichols ◽  
Srinivas Vaidyanathan ◽  
Beth Gardner ◽  
...  

2007 ◽  
Vol 77 (3) ◽  
pp. 465-481 ◽  
Author(s):  
J. Andrew Royle ◽  
Marc Kéry ◽  
Roland Gautier ◽  
Hans Schmid

2019 ◽  
Vol 31 ◽  
pp. 100301 ◽  
Author(s):  
Mitzi Morris ◽  
Katherine Wheeler-Martin ◽  
Dan Simpson ◽  
Stephen J. Mooney ◽  
Andrew Gelman ◽  
...  

2019 ◽  
Vol 76 (8) ◽  
pp. 1423-1431 ◽  
Author(s):  
Priscila F.M. Lopes ◽  
Júlia T. Verba ◽  
Alpina Begossi ◽  
Maria Grazia Pennino

Many developing countries lack information to manage their endangered species, urging the need for affordable and reliable information. We used Bayesian hierarchical spatial models, with oceanographic variables, to predict the distribution range of Epinephelus marginatus, the dusky grouper, for the entire Southwest Atlantic. We ran a model using scientific information gathered from the literature and another using information gathered from fishers on species presence or absence. In both models, temperature was an important determinant of species occurrence. The predicted occurrence of the dusky grouper overlapped widely (Schoener’s D = 0.71; Warren’s I = 0.91) between the models, despite small differences on the southern and northern extremes of the distribution. These results suggest that basic information provided by fishers on species occurrence in their area can be reliable enough to predict species occurrence over large scales and can be potentially useful for marine spatial planning. Fishers’ knowledge may be an even more viable alternative to data collection than what was previously thought, for countries that both struggle with financial limitations and have urgent conservation needs.


2015 ◽  
pp. 1-10
Author(s):  
Ali Arab ◽  
Mevin B. Hooten ◽  
Christopher K. Wikle

2017 ◽  
pp. 837-846 ◽  
Author(s):  
Ali Arab ◽  
Mevin B. Hooten ◽  
Christopher K. Wikle

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