A Comparison of Internal Eliminated Sequences in the Genes that Encode Two K+-Channel Isoforms in Paramecium tetraurelia

1998 ◽  
Vol 45 (4) ◽  
pp. 459-465 ◽  
Author(s):  
Kit-Yin Ling ◽  
Brian Vaillant ◽  
W. John Haynes ◽  
Yoshiro Saimi ◽  
Ching Kung
2003 ◽  
Vol 23 (20) ◽  
pp. 7152-7162 ◽  
Author(s):  
Ariane Gratias ◽  
Mireille Bétermier

ABSTRACT In ciliates, the development of the somatic macronucleus involves the programmed excision of thousands of internal eliminated sequences (IES) scattered throughout the germ line genome. Previous work with Tetrahymena thermophila has suggested that excision is initiated by a staggered double-strand break (DSB) at one IES end. Nucleophilic attack of the other end by the 3′OH group carried by the firstly broken chromosome end leads to macronuclear junction closure. In this study, we mapped the 3′OH and 5′PO4 groups that are developmentally released at Paramecium IES boundaries, which are marked by two conserved TA dinucleotides, one of which remains in the macronuclear genome after excision. We show that initiating DSBs at both ends generate 4-base 5′ overhangs centered on the TA. Based on the observed processing of the 5′-terminal residue of each overhang, we present a new model for the precise closure of macronuclear chromosomes in Paramecium tetraurelia, different from that previously proposed for Tetrahymena. In our model, macronucleus-destined broken ends are aligned through the partial pairing of their 5′-nTAn-3′ extensions and joined after trimming of the 5′ flaps.


Genetics ◽  
2001 ◽  
Vol 159 (3) ◽  
pp. 987-995 ◽  
Author(s):  
Kit-Yin Ling ◽  
W John Haynes ◽  
Laura Oesterle ◽  
Ching Kung ◽  
Robin R Preston ◽  
...  

Abstract PAK11 is 1 of more than 15 members in a gene family that encodes K+-channel pore-forming subunits in Paramecium tetraurelia. Microinjection of PAK11 DNA into macronuclei of wild-type cells results in clonal transformants that exhibit hyperexcitable swimming behaviors reminiscent of certain loss-of-K+-current mutants. PAK2, a distant homolog of PAK11, does not have the same effect. But PAK1, a close homolog of PAK11, induces the same hyperexcitability. Cutting the PAK11 open reading frame (ORF) with restriction enzymes before injection removes this effect entirely. Microinjection of PAK11 ORF flanked by the calmodulin 5′ and 3′ UTRs also induces the same hyperexcitable phenotype. Direct examination of transformed cells under voltage clamp reveals that two different Ca2+-activated K+-specific currents are reduced in amplitude. This reduction does not correlate with a deficit of PAK11 message, since RNA is clearly produced from the injected transgenes. Insertion of a single nucleotide at the start of the PAK11 ORF does not affect the RNA level but completely abolishes the phenotypic transformation. Thus, the reduction of K+ currents by the expression of the K+-channel transgenes reported here is likely to be the consequence of a post-translational event. The complexity of behavioral changes, possible mechanisms, and implications in Paramecium biology are discussed.


2006 ◽  
Vol 33 (S 1) ◽  
Author(s):  
G. Naros ◽  
O. Yalcin ◽  
S. Maljevic ◽  
T.V. Wuttke ◽  
A. Dervent ◽  
...  

Diabetes ◽  
1998 ◽  
Vol 47 (8) ◽  
pp. 1274-1280 ◽  
Author(s):  
R. Ashfield ◽  
S. J. Ashcroft
Keyword(s):  

Diabetes ◽  
1996 ◽  
Vol 45 (2) ◽  
pp. 267-269 ◽  
Author(s):  
N. Iwasaki ◽  
M. Kawamura ◽  
K. Yamagata ◽  
N. J. Cox ◽  
S. Karibe ◽  
...  

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