Procedures for Sampling Deep Subsurface Microbial Communities in Unconsolidated Sediments

1992 ◽  
Vol 12 (1) ◽  
pp. 96-104 ◽  
Author(s):  
Brent F. Russell ◽  
Tommy J. Phelps ◽  
William T. Griffin ◽  
Kenneth A. Sargent
2021 ◽  
Vol 12 ◽  
Author(s):  
Charles S. Cockell ◽  
Bettina Schaefer ◽  
Cornelia Wuchter ◽  
Marco J. L. Coolen ◽  
Kliti Grice ◽  
...  

We report on the effect of the end-Cretaceous impact event on the present-day deep microbial biosphere at the impact site. IODP-ICDP Expedition 364 drilled into the peak ring of the Chicxulub crater, México, allowing us to investigate the microbial communities within this structure. Increased cell biomass was found in the impact suevite, which was deposited within the first few hours of the Cenozoic, demonstrating that the impact produced a new lithological horizon that caused a long-term improvement in deep subsurface colonization potential. In the biologically impoverished granitic rocks, we observed increased cell abundances at impact-induced geological interfaces, that can be attributed to the nutritionally diverse substrates and/or elevated fluid flow. 16S rRNA gene amplicon sequencing revealed taxonomically distinct microbial communities in each crater lithology. These observations show that the impact caused geological deformation that continues to shape the deep subsurface biosphere at Chicxulub in the present day.


2005 ◽  
Vol 6 (7) ◽  
pp. n/a-n/a ◽  
Author(s):  
Li-Hung Lin ◽  
James Hall ◽  
Johanna Lippmann-Pipke ◽  
Julie A. Ward ◽  
Barbara Sherwood Lollar ◽  
...  

1999 ◽  
Vol 5 (2) ◽  
pp. 59-66 ◽  
Author(s):  
Yuki Murakami ◽  
Takeshi Naganuma ◽  
Teruki Iwatsuki

2018 ◽  
Author(s):  
Sian Erin Ford ◽  
◽  
Allyson L. Brady ◽  
Oliver Warr ◽  
Garnet S. Lollar ◽  
...  

2020 ◽  
Vol 27 ◽  
pp. 1-23 ◽  
Author(s):  
Himadri Bose ◽  
Avishek Dutta ◽  
Ajoy Roy ◽  
Abhishek Gupta ◽  
Sourav Mukhopadhyay ◽  
...  

Abstract. Scientific deep drilling of the Koyna pilot borehole into the continental crust up to a depth of 3000 m below the surface at the Deccan Traps, India, provided a unique opportunity to explore microbial life within the deep granitic bedrock of the Archaean Eon. Microbial communities of the returned drilling fluid (fluid returned to the mud tank from the underground during the drilling operation; designated here as DF) sampled during the drilling operation of the Koyna pilot borehole at a depth range of 1681–2908 metres below the surface (m b.s.) were explored to gain a glimpse of the deep biosphere underneath the continental crust. Change of pH to alkalinity, reduced abundance of Si and Al, but enrichment of Fe, Ca and SO42- in the samples from deeper horizons suggested a gradual infusion of elements or ions from the crystalline bedrock, leading to an observed geochemical shift in the DF. Microbial communities of the DFs from deeper horizons showed progressively increased abundance of Firmicutes, Gammaproteobacteria and Actinobacteria as bacterial taxa and members of Euryarchaeota as the major archaeal taxa. Microbial families, well known to strive in strictly anaerobic and extremophilic environments, (e.g. Thermoanaerobacteraceae, Clostridiaceae, Bacillaceae, Carnobacteriaceae, Ruminococcaceae), increased in the samples obtained at a depth range of 2000 to 2908 m b.s. Phylogenetic analysis of common and unique operational taxonomic units (OTUs) of DF samples indicated signatures of extremophilic and deep subsurface relevant bacterial genera (Mongoliitalea, Hydrogenophaga, Marinilactibacillus, Anoxybacillus, Symbiobacterium, Geosporobacter, Thermoanaerobacter). Thermophilic, obligatory anaerobic sulfate-reducing bacterial taxa known to inhabit the deep subsurface were enriched from DF samples using sulfate as a terminal electron acceptor. This report on the geomicrobiology of the DF obtained during drilling of the deep subsurface of the Deccan Traps showed new opportunities to investigate deep life from terrestrial, granite-rock-hosted habitats.


2013 ◽  
Vol 16 (2) ◽  
pp. 545-558 ◽  
Author(s):  
Anna Lewin ◽  
Jostein Johansen ◽  
Alexander Wentzel ◽  
Hans Kristian Kotlar ◽  
Finn Drabløs ◽  
...  

2003 ◽  
Vol 45 (2) ◽  
pp. 115-125 ◽  
Author(s):  
Konstantinos Ar Kormas ◽  
David C Smith ◽  
Virginia Edgcomb ◽  
Andreas Teske

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