Spatial information-embedded fully convolutional networks for multi-organ segmentation with improved data augmentation and instance normalization

2020 ◽  
Author(s):  
Chen Shen ◽  
Chenglong Wang ◽  
Holger R. Roth ◽  
Masahiro Oda ◽  
Yuichiro Hayashi ◽  
...  
Keyword(s):  
Data Augmentation ◽  
Spatial Information ◽  
Convolutional Networks ◽  
Fully Convolutional Networks

scholarly journals Boundary Loss-Based 2.5D Fully Convolutional Neural Networks Approach for Segmentation: A Case Study of the Liver and Tumor on Computed Tomography

Algorithms ◽  
2021 ◽  
Vol 14 (5) ◽  
pp. 144
Author(s):  
Yuexing Han ◽  
Xiaolong Li ◽  
Bing Wang ◽  
Lu Wang
Keyword(s):  
Image Segmentation ◽  
Spatial Information ◽  
Medical Images ◽  
Tumor Segmentation ◽  
Convolutional Networks ◽  
Learning Framework ◽  
Fully Convolutional Networks ◽  
Segmentation Accuracy ◽  
Boundary Information

Image segmentation plays an important role in the field of image processing, helping to understand images and recognize objects. However, most existing methods are often unable to effectively explore the spatial information in 3D image segmentation, and they neglect the information from the contours and boundaries of the observed objects. In addition, shape boundaries can help to locate the positions of the observed objects, but most of the existing loss functions neglect the information from the boundaries. To overcome these shortcomings, this paper presents a new cascaded 2.5D fully convolutional networks (FCNs) learning framework to segment 3D medical images. A new boundary loss that incorporates distance, area, and boundary information is also proposed for the cascaded FCNs to learning more boundary and contour features from the 3D medical images. Moreover, an effective post-processing method is developed to further improve the segmentation accuracy. We verified the proposed method on LITS and 3DIRCADb datasets that include the liver and tumors. The experimental results show that the performance of the proposed method is better than existing methods with a Dice Per Case score of 74.5% for tumor segmentation, indicating the effectiveness of the proposed method.

scholarly journals Dual Path Attention Net for Remote Sensing Semantic Image Segmentation

2020 ◽  
Vol 9 (10) ◽  
pp. 571
Author(s):  
Jinglun Li ◽  
Jiapeng Xiu ◽  
Zhengqiu Yang ◽  
Chen Liu
Keyword(s):  
Remote Sensing ◽  
Spatial Information ◽  
Semantic Segmentation ◽  
Remote Sensing Images ◽  
Convolutional Networks ◽  
Fully Convolutional Networks ◽  
Augmentation Strategies ◽  
Rich Information ◽  
The Mean ◽  
The Rich

Semantic segmentation plays an important role in being able to understand the content of remote sensing images. In recent years, deep learning methods based on Fully Convolutional Networks (FCNs) have proved to be effective for the sematic segmentation of remote sensing images. However, the rich information and complex content makes the training of networks for segmentation challenging, and the datasets are necessarily constrained. In this paper, we propose a Convolutional Neural Network (CNN) model called Dual Path Attention Network (DPA-Net) that has a simple modular structure and can be added to any segmentation model to enhance its ability to learn features. Two types of attention module are appended to the segmentation model, one focusing on spatial information the other focusing upon the channel. Then, the outputs of these two attention modules are fused to further improve the network’s ability to extract features, thus contributing to more precise segmentation results. Finally, data pre-processing and augmentation strategies are used to compensate for the small number of datasets and uneven distribution. The proposed network was tested on the Gaofen Image Dataset (GID). The results show that the network outperformed U-Net, PSP-Net, and DeepLab V3+ in terms of the mean IoU by 0.84%, 2.54%, and 1.32%, respectively.

scholarly journals Automatic Deep Learning Semantic Segmentation of Ultrasound Thyroid Cineclips using Recurrent Fully Convolutional Networks

IEEE Access ◽  
2020 ◽  
pp. 1-1
Author(s):  
Jeremy M. Webb ◽  
Duane D. Meixner ◽  
Shaheeda A. Adusei ◽  
Eric C. Polley ◽  
Mostafa Fatemi ◽  
...  
Keyword(s):  
Deep Learning ◽  
Semantic Segmentation ◽  
Convolutional Networks ◽  
Fully Convolutional Networks

scholarly journals Domain Adaptation for Semantic Segmentation of Historical Panchromatic Orthomosaics in Central Africa

2021 ◽  
Vol 10 (8) ◽  
pp. 523
Author(s):  
Nicholus Mboga ◽  
Stefano D’Aronco ◽  
Tais Grippa ◽  
Charlotte Pelletier ◽  
Stefanos Georganos ◽  
...  
Keyword(s):  
Land Cover ◽  
Domain Adaptation ◽  
Central Africa ◽  
Semantic Segmentation ◽  
Target Domain ◽  
Convolutional Networks ◽  
Fully Convolutional Networks ◽  
The Cost ◽  
Performance Gains

Multitemporal environmental and urban studies are essential to guide policy making to ultimately improve human wellbeing in the Global South. Land-cover products derived from historical aerial orthomosaics acquired decades ago can provide important evidence to inform long-term studies. To reduce the manual labelling effort by human experts and to scale to large, meaningful regions, we investigate in this study how domain adaptation techniques and deep learning can help to efficiently map land cover in Central Africa. We propose and evaluate a methodology that is based on unsupervised adaptation to reduce the cost of generating reference data for several cities and across different dates. We present the first application of domain adaptation based on fully convolutional networks for semantic segmentation of a dataset of historical panchromatic orthomosaics for land-cover generation for two focus cities Goma-Gisenyi and Bukavu. Our experimental evaluation shows that the domain adaptation methods can reach an overall accuracy between 60% and 70% for different regions. If we add a small amount of labelled data from the target domain, too, further performance gains can be achieved.

scholarly journals Building Multi-Feature Fusion Refined Network for Building Extraction from High-Resolution Remote Sensing Images

2021 ◽  
Vol 13 (14) ◽  
pp. 2794
Author(s):  
Shuhao Ran ◽  
Xianjun Gao ◽  
Yuanwei Yang ◽  
Shaohua Li ◽  
Guangbin Zhang ◽  
...  
Keyword(s):  
Feature Fusion ◽  
Small Scale ◽  
Automatic Extraction ◽  
Learning Approaches ◽  
Building Extraction ◽  
Visual Interpretation ◽  
Learning Capacity ◽  
Convolutional Networks ◽  
Fully Convolutional Networks ◽  
Great Progress

Deep learning approaches have been widely used in building automatic extraction tasks and have made great progress in recent years. However, the missing detection and wrong detection causing by spectrum confusion is still a great challenge. The existing fully convolutional networks (FCNs) cannot effectively distinguish whether the feature differences are from one building or the building and its adjacent non-building objects. In order to overcome the limitations, a building multi-feature fusion refined network (BMFR-Net) was presented in this paper to extract buildings accurately and completely. BMFR-Net is based on an encoding and decoding structure, mainly consisting of two parts: the continuous atrous convolution pyramid (CACP) module and the multiscale output fusion constraint (MOFC) structure. The CACP module is positioned at the end of the contracting path and it effectively minimizes the loss of effective information in multiscale feature extraction and fusion by using parallel continuous small-scale atrous convolution. To improve the ability to aggregate semantic information from the context, the MOFC structure performs predictive output at each stage of the expanding path and integrates the results into the network. Furthermore, the multilevel joint weighted loss function effectively updates parameters well away from the output layer, enhancing the learning capacity of the network for low-level abstract features. The experimental results demonstrate that the proposed BMFR-Net outperforms the other five state-of-the-art approaches in both visual interpretation and quantitative evaluation.

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