scholarly journals Archaea dominate oxic subseafloor communities over multimillion-year time scales

2019 ◽  
Vol 5 (6) ◽  
pp. eaaw4108 ◽  
Author(s):  
Aurèle Vuillemin ◽  
Scott D. Wankel ◽  
Ömer K. Coskun ◽  
Tobias Magritsch ◽  
Sergio Vargas ◽  
...  

Ammonia-oxidizing archaea (AOA) dominate microbial communities throughout oxic subseafloor sediment deposited over millions of years in the North Atlantic Ocean. Rates of nitrification correlated with the abundance of these dominant AOA populations, whose metabolism is characterized by ammonia oxidation, mixotrophic utilization of organic nitrogen, deamination, and the energetically efficient chemolithoautotrophic hydroxypropionate/hydroxybutyrate carbon fixation cycle. These AOA thus have the potential to couple mixotrophic and chemolithoautotrophic metabolism via mixotrophic deamination of organic nitrogen, followed by oxidation of the regenerated ammonia for additional energy to fuel carbon fixation. This metabolic feature likely reduces energy loss and improves AOA fitness under energy-starved, oxic conditions, thereby allowing them to outcompete other taxa for millions of years.

2008 ◽  
Vol 5 (2) ◽  
pp. 1727-1764 ◽  
Author(s):  
G. Charria ◽  
I. Dadou ◽  
J. Llido ◽  
M. Drévillon ◽  
V. Garçon

Abstract. An eddy-permitting coupled ecosystem-circulation model including dissolved organic matter is used to estimate the dissolved organic nitrogen (DON) supply sustaining primary production in the subtropical North Atlantic Ocean. After an analysis of the coupled model performances compared to the data, a sensitivity study demonstrates the strong impact of parameter values linked to the hydrolysis of particulate organic nitrogen and remineralisation of dissolved organic nitrogen on surface biogeochemical concentrations. The physical transport of dissolved organic nitrogen contributes to maintain the level of primary production in this subtropical gyre. It is dominated by the meridional component. We estimate a meridional net input of 0.039 molN.m−2.yr−1 over the domain (13°–35° N and 71–40° W) in the subtropical gyre. This supply is driven by the Ekman transport in the southern part and by non-Ekman transport (meridional current components, eddies, meanders and fronts) in the northern part of the subtropical gyre. At 12° N, our estimate (18 kmolN.s-1) confirms the estimation (17.9 kmolN.s-1) made by Roussenov et al. (2006) using a simplified biogeochemical model in a large scale model. This DON meridional input is within the range (from 0.05 up to 0.24 molN.m−2.yr-1) (McGillicuddy and Robinson, 1997; Oschlies, 2002) of all other possible mechanisms (mesoscale activity, nitrogen fixation, atmospheric deposition) fuelling primary production in the subtropical gyre. The present study confirms that the lateral supply of dissolved organic nitrogen might be important in closing the N budget over the North Atlantic Ocean and quantifies the importance of meridional input of dissolved organic nitrogen.


2008 ◽  
Vol 5 (5) ◽  
pp. 1437-1455 ◽  
Author(s):  
G. Charria ◽  
I. Dadou ◽  
J. Llido ◽  
M. Drévillon ◽  
V. Garçon

Abstract. An eddy-permitting coupled ecosystem-circulation model including dissolved organic matter is used to estimate the dissolved organic nitrogen (DON) supply sustaining primary production in the subtropical north Atlantic Ocean. After an analysis of the coupled model performances compared to the data, a sensitivity study demonstrates the strong impact of parameter values linked to the hydrolysis of particulate organic nitrogen and remineralisation of dissolved organic nitrogen on surface biogeochemical concentrations. The physical transport of dissolved organic nitrogen contributes to maintain the level of primary production in this subtropical gyre. It is dominated by the meridional component. We estimate a meridional net input of 0.039 molN m−2 yr−1 over the domain (13–35° N and 71–40° W) in the subtropical gyre. This supply is driven by the Ekman transport in the southern part and by non-Ekman transport (meridional current components, eddies, meanders and fronts) in the northern part of the subtropical gyre. At 12° N, our estimate (18 kmolN s−1) confirms the estimation (17.9 kmolN s−1) made by Roussenov et al. (2006) using a simplified biogeochemical model in a large scale model. This DON meridional input is within the range (from 0.05 up to 0.24 molN m−2 yr−1) (McGillicuddy and Robinson, 1997; Oschlies, 2002) of all other possible mechanisms (mesoscale activity, nitrogen fixation, atmospheric deposition) fuelling primary production in the subtropical gyre. The present study confirms that the lateral supply of dissolved organic nitrogen might be important in closing the N budget over the north Atlantic Ocean and quantifies the importance of meridional input of dissolved organic nitrogen.


2018 ◽  
Vol 612 ◽  
pp. 1141-1148 ◽  
Author(s):  
Min Zhang ◽  
Yuanling Zhang ◽  
Qi Shu ◽  
Chang Zhao ◽  
Gang Wang ◽  
...  

2021 ◽  
Vol 56 (7-8) ◽  
pp. 2027-2056
Author(s):  
Sandra M. Plecha ◽  
Pedro M. M. Soares ◽  
Susana M. Silva-Fernandes ◽  
William Cabos

Eos ◽  
1986 ◽  
Vol 67 (44) ◽  
pp. 835 ◽  
Author(s):  
W. E. Esaias ◽  
G. C. Feldman ◽  
C. R. McClain ◽  
J. A. Elrod

2014 ◽  
Vol 31 (6) ◽  
pp. 1434-1445 ◽  
Author(s):  
Federico Ienna ◽  
Young-Heon Jo ◽  
Xiao-Hai Yan

Abstract Subsurface coherent vortices in the North Atlantic, whose saline water originates from the Mediterranean Sea and which are known as Mediterranean eddies (meddies), have been of particular interest to physical oceanographers since their discovery, especially for their salt and heat transport properties into the North Atlantic Ocean. Many studies in the past have been successful in observing and studying the typical properties of meddies by probing them with in situ techniques. The use of remote sensing techniques would offer a much cheaper and easier alternative for studying these phenomena, but only a few past studies have been able to study meddies by remote sensing, and a reliable method for observing them remotely remains elusive. This research presents a new way of locating and tracking meddies in the North Atlantic Ocean using satellite altimeter data. The method presented in this research makes use of ensemble empirical mode decomposition (EEMD) as a means to isolate the surface expressions of meddies on the ocean surface and separates them from any other surface constituents, allowing robust meddies to be consistently tracked by satellite. One such meddy is successfully tracked over a 6-month time period (2 November 2005 to 17 May 2006). Results of the satellite tracking method are verified using expendable bathythermographs (XBT).


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