Molecular Source Tracking and Molecular Subtyping

2019 ◽  
pp. 971-988 ◽  
Author(s):  
Peter Gerner-Smidt ◽  
Eija Trees ◽  
Heather Carleton ◽  
Lee Katz ◽  
Henk den Bakker ◽  
...  
2014 ◽  
pp. 1059-1077 ◽  
Author(s):  
Peter Gerner-Smidt ◽  
Eija Hyytia-Trees ◽  
Timothy J. Barrett

2012 ◽  
Vol 78 (12) ◽  
pp. 4420-4433 ◽  
Author(s):  
Brian D. Sauders ◽  
Jon Overdevest ◽  
Esther Fortes ◽  
Katy Windham ◽  
Ynte Schukken ◽  
...  

ABSTRACTA total of 442Listeriaisolates, including 234Listeria seeligeri, 80L. monocytogenes, 74L. welshimeri, 50L. innocua, and 4L. marthiiisolates, were obtained from 1,805 soil, water, and other environmental samples collected over 2 years from four urban areas and four areas representing natural environments.Listeriaspp. showed similar prevalences in samples from natural (23.4%) and urban (22.3%) environments. WhileL. seeligeriandL. welshimeriwere significantly associated with natural environments (P≤ 0.0001),L. innocuaandL. monocytogeneswere significantly associated with urban environments (P≤ 0.0001). Sequencing ofsigBfor all isolates revealed 67 allelic types with a higher level of allelic diversity among isolates from urban environments. SomeListeriaspp. andsigBallelic types showed significant associations with specific urban and natural areas. Nearest-neighbor analyses also showed that certainListeriaspp. andsigBallelic types were spatially clustered within both natural and urban environments, and there was evidence that these species and allelic types persisted over time in specific areas. Our data show that members of the genusListerianot only are common in urban and natural environments but also show species- and subtype-specific associations with different environments and areas. This indicates thatListeriaspecies and subtypes within these species may show distinct ecological preferences, which suggests (i) that molecular source-tracking approaches can be developed forListeriaand (ii) that detection of someListeriaspecies may not be a good indicator forL. monocytogenes.


2014 ◽  
pp. 93-136 ◽  
Author(s):  
Thomas S. Whittam ◽  
Teresa M. Bergholz

2021 ◽  
Vol 188 ◽  
pp. 116537
Author(s):  
Raúl Carrey ◽  
Elisenda Ballesté ◽  
Anicet R. Blanch ◽  
Francisco Lucena ◽  
Pere Pons ◽  
...  

2010 ◽  
Vol 44 (3) ◽  
pp. 230-239 ◽  
Author(s):  
Mari Rodríguez de Evgrafov ◽  
Jeffery J. Walker ◽  
Norman R. Pace ◽  
Mark T. Hernandez

PLoS ONE ◽  
2020 ◽  
Vol 15 (4) ◽  
pp. e0232054
Author(s):  
Kevan M. Yamahara ◽  
Daniel P. Keymer ◽  
Blythe A. Layton ◽  
Sarah P. Walters ◽  
Rachelle S. Thompson ◽  
...  

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