scholarly journals Draft Whole-Genome Sequence of “Candidatus Liberibacter asiaticus” Strain TX1712 from Citrus in Texas

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
W. Cai ◽  
Z. Yan ◽  
J. Rascoe ◽  
M. J. Stulberg
Keyword(s):  
Genome Sequence ◽  
Reference Genome ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Whole Genome Sequence ◽  
Candidatus Liberibacter Asiaticus ◽  
Content Type ◽  
Candidatus Liberibacter ◽  
Liberibacter Asiaticus ◽  
Reading Frames

The draft genome sequence of “Candidatus Liberibacter asiaticus” strain TX1712, obtained from a Texas citrus tree, is reported here. Strain TX1712 has a draft genome size of 1,203,333 bp, a G+C content of 36.4%, 1,230 predicted open reading frames, and 41 RNAs and comprises 97.4% of the psy62 reference genome.

scholarly journals Draft Whole-Genome Sequence of “Candidatus Liberibacter asiaticus” Strain TX2351 Isolated from Asian Citrus Psyllids in Texas, USA

2017 ◽  
Vol 5 (15) ◽  
Author(s):  
Madhurababu Kunta ◽  
Zheng Zheng ◽  
Fengnian Wu ◽  
John V. da Graca ◽  
Jong-Won Park ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
South Texas ◽  
Open Reading Frames ◽  
Whole Genome Sequence ◽  
Candidatus Liberibacter Asiaticus ◽  
Candidatus Liberibacter ◽  
Liberibacter Asiaticus ◽  
Rna Genes ◽  
Reading Frames

ABSTRACT We report here the draft genome sequence of “Candidatus Liberibacter asiaticus” strain TX2351, collected from Asian citrus psyllids in south Texas, USA. The TX2351 genome has a size of 1,252,043 bp, a G+C content of 36.5%, 1,184 predicted open reading frames, and 52 RNA genes.

scholarly journals Draft Whole-Genome Sequence of a “Candidatus Liberibacter asiaticus” Strain from Yunnan, China

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Yanling Chen ◽  
Tao Li ◽  
Zheng Zheng ◽  
Meirong Xu ◽  
Xiaoling Deng
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Whole Genome Sequence ◽  
Content Type ◽  
A Genome ◽  
Candidatus Liberibacter ◽  
Liberibacter Asiaticus ◽  
Rna Genes ◽  
Reading Frames

The draft genome sequence of “Candidatus Liberibacter asiaticus” strain YNJS7C, isolated from a navel orange tree in Yunnan Province, China, is presented here. The YNJS7C strain has a genome size of 1,258,986 bp, with a G+C content of 36.6%, 1,174 predicted open reading frames, and 53 RNA genes.

scholarly journals Draft Genome Sequence of “ Candidatus Liberibacter asiaticus” from Diaphorina citri in Guangdong, China

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
F. Wu ◽  
Z. Zheng ◽  
X. Deng ◽  
Y. Cen ◽  
G. Liang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Diaphorina Citri ◽  
Candidatus Liberibacter Asiaticus ◽  
A Genome ◽  
Candidatus Liberibacter ◽  
Liberibacter Asiaticus ◽  
Reading Frames

The draft genome sequence of “ Candidatus Liberibacter asiaticus” strain YCPsy from an Asian citrus psyllid ( Diaphorina citri ) in Guangdong, China, is reported here. The YCPsy strain has a genome size of 1,233,647 bp, 36.5% G+C content, 1,171 open reading frames (ORFs), and 53 RNAs.

scholarly journals Genome Resource for the Huanglongbing Causal Agent ‘Candidatus Liberibacter asiaticus’ Strain AHCA17 from Citrus Root Tissue in California, USA

Plant Disease ◽  
2020 ◽  
Vol 104 (3) ◽  
pp. 627-629
Author(s):  
Weili Cai ◽  
Schyler Nunziata ◽  
Stefano Costanzo ◽  
Lucita Kumagai ◽  
John Rascoe ◽  
...  
Keyword(s):  
Draft Genome ◽  
Open Reading Frames ◽  
Genome Diversity ◽  
Candidatus Liberibacter Asiaticus ◽  
Candidatus Liberibacter ◽  
Citrus Root ◽  
Citrus Huanglongbing ◽  
Liberibacter Asiaticus ◽  
Metagenome Sequence ◽  
Reading Frames

‘Candidatus Liberibacter asiaticus’ is the unculturable causative agent of citrus huanglongbing disease. Here, we report the first citrus root metagenome sequence containing the draft genome of ‘Ca. L. asiaticus’ strain AHCA17, obtained from a pummelo tree in California. The assembled genome was 1.2 Mbp and resulted in 37 contigs (N50 = 158.7 kbp) containing 1,057 predicted open reading frames and 45 RNA-coding genes. This draft genome will provide a valuable resource in further study of ‘Ca. L. asiaticus’ genome diversity and pathogen epidemiology.

scholarly journals De Novo Whole-Genome Sequence of Xylella fastidiosa subsp. multiplex Strain BB01 Isolated from a Blueberry in Georgia, USA

2017 ◽  
Vol 5 (6) ◽  
Author(s):  
Christopher Van Horn ◽  
Chung-Jan Chang ◽  
Jianchi Chen
Keyword(s):  
Genome Sequence ◽  
De Novo ◽  
Xylella Fastidiosa ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Rna Genes ◽  
Reading Frames

ABSTRACT This study reports a de novo-assembled draft genome sequence of Xylella fastidiosa subsp. multiplex strain BB01 causing blueberry bacterial leaf scorch in Georgia, USA. The BB01 genome is 2,517,579 bp, with a G+C content of 51.8%, 2,943 open reading frames (ORFs), and 48 RNA genes.

scholarly journals Draft Genome Sequence of “ Candidatus Liberibacter asiaticus” from a Citrus Tree in San Gabriel, California

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
F. Wu ◽  
L. Kumagai ◽  
G. Liang ◽  
X. Deng ◽  
Z. Zheng ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Citrus Tree ◽  
A Genome ◽  
Candidatus Liberibacter ◽  
Liberibacter Asiaticus ◽  
Rna Genes ◽  
Reading Frames

The draft genome sequence of “ Candidatus Liberibacter asiaticus” strain SGCA5 from an orange citrus tree in San Gabriel, California, is reported here. SGCA5 has a genome size of 1,201,445 bp, a G+C content of 36.4%, 1,152 predicted open reading frames (ORFs), and 42 RNA genes.

scholarly journals Whole-Genome Sequence of Bacillus subtilis WS1A, a Promising Fish Probiotic Strain Isolated from Marine Sponge of the Bay of Bengal

2020 ◽  
Vol 9 (39) ◽  
Author(s):  
M. Mahbubur Rahman ◽  
Sulav Indra Paul ◽  
Tasmina Akter ◽  
Alfred Chin Yen Tay ◽  
M. Javed Foysal ◽  
...  
Keyword(s):  
Bacillus Subtilis ◽  
Genome Sequence ◽  
De Novo ◽  
Draft Genome ◽  
Probiotic Strain ◽  
Open Reading Frames ◽  
Whole Genome Sequence ◽  
Content Type ◽  
Aeromonas Veronii ◽  
Reading Frames

ABSTRACT This study reports the draft genome sequence of a promising fish probiotic, Bacillus subtilis strain WS1A, that possesses antimicrobial activity against Aeromonas veronii and suppressed motile Aeromonas septicemia in Labeo rohita. The de novo assembly resulted in an estimated chromosome size of 4,148,460 bp, with 4,288 open reading frames.

scholarly journals Genome Sequence Resource of “Candidatus Liberibacter asiaticus” strain Myan16 from Myanmar

Plant Disease ◽  
2020 ◽  
Author(s):  
Yongqin Zheng ◽  
jun guo ◽  
Xiaoling Deng ◽  
Zheng Zheng
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Sequence Database ◽  
Candidatus Liberibacter Asiaticus ◽  
Genome Sequence Database ◽  
Citrus Production ◽  
Candidatus Liberibacter ◽  
Citrus Huanglongbing ◽  
Liberibacter Asiaticus

“Candidatus Liberibacter asiaticus” (CaLas), an uncultured α-proteobacterium, is associated with citrus Huanglongbing (HLB, yellow shoot disease), a destructive disease threatening citrus production worldwide. Here, we reported the draft genome sequence of CaLas strain Myan16 from a HLB-affected lime tree in Myitkyina, Kachin State, Myanmar. The strain Myan16 genome is 1,229,102 bp with an average G+C content of 36.4%, along with a circular prophage: P-Myan16-2 (36,303 bp, Type 2). This is the first genome sequence of CaLas strain from Myanmar, which will enrich the current CaLas genome sequence database and facilitate HLB epidemiology research in Asia and world.

scholarly journals Draft Genome Sequence of Bradyrhizobium elkanii TnphoA 33, a Producer of Polyhydroxyalkanoates

2017 ◽  
Vol 5 (8) ◽  
Author(s):  
Erica M. Lopes ◽  
Luciano T. Kishi ◽  
Camila C. Fernandes ◽  
Fernanda Larozza Paganelli ◽  
Lucia M. C. Alves ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Nitrogen Fixing ◽  
Content Type ◽  
Draft Genome Assembly ◽  
Bradyrhizobium Elkanii ◽  
Reading Frames

ABSTRACT The genus Bradyrhizobium comprises bacteria with the ability to form nitrogen-fixing symbioses with legumes. They are of great interest in agriculture, as well as for the production of biopolymers such as polyhydroxyalkanoates. Here, we report the draft genome assembly of Bradyrhizobium elkanii TnphoA 33 comprising 9 Mb, 1,124 contigs, and 9,418 open reading frames.

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