scholarly journals Complete Genome Sequence of wBp, the Wolbachia Endosymbiont of Brugia pahangi FR3

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Jarrett F. Lebov ◽  
John Mattick ◽  
Silvia Libro ◽  
Benjamin C. Sparklin ◽  
Matthew Chung ◽  
...  
Keyword(s):  
Lymphatic Filariasis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Filarial Nematode ◽  
Brugia Pahangi ◽  
Content Type ◽  
Pacific Biosciences ◽  
Oxford Nanopore ◽  
Wolbachia Endosymbiont

ABSTRACT Lymphatic filariasis is a devastating disease caused by filarial nematode roundworms, which contain obligate Wolbachia endosymbionts. Here, we assembled the genome of wBp, the Wolbachia endosymbiont of the filarial nematode Brugia pahangi, from Illumina, Pacific Biosciences, and Oxford Nanopore data. The complete, circular genome is 1,072,967 bp.

scholarly journals Complete Genome Sequence of wAna, the Wolbachia Endosymbiont of Drosophila ananassae

2019 ◽  
Vol 8 (43) ◽  
Author(s):  
Mark T. Gasser ◽  
Matthew Chung ◽  
Robin E. Bromley ◽  
Suvarna Nadendla ◽  
Julie C. Dunning Hotopp
Keyword(s):  
Comparative Genomics ◽  
Gene Transfer ◽  
Lateral Gene Transfer ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Drosophila Ananassae ◽  
Content Type ◽  
Oxford Nanopore ◽  
Wolbachia Endosymbiont

Here, we present the complete genome sequence of the Wolbachia endosymbiont wAna, isolated from Drosophila ananassae and derived from Oxford Nanopore and Illumina sequencing. We anticipate that this will aid in Wolbachia comparative genomics and the assembly of D. ananassae specifically in regions containing extensive lateral gene transfer events.

scholarly journals Nearly Complete Genome Sequence of Brugia pahangi FR3

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
John Mattick ◽  
Silvia Libro ◽  
Benjamin C. Sparklin ◽  
Matthew Chung ◽  
Robin E. Bromley ◽  
...  
Keyword(s):  
Y Chromosome ◽  
Genome Sequence ◽  
X Chromosome ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Brugia Pahangi ◽  
Content Type ◽  
Filarial Nematodes ◽  
Zoonotic Parasite

ABSTRACT Brugia pahangi is a zoonotic parasite that is closely related to human-infecting filarial nematodes. Here, we report the nearly complete genome of Brugia pahangi, including assemblies of four autosomes and an X chromosome, with only seven gaps. The Y chromosome is still not completely assembled.

scholarly journals Complete Genome Sequence of Rubrobacter xylanophilus Strain AA3-22, Isolated from Arima Onsen in Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Natsuki Tomariguchi ◽  
Kentaro Miyazaki
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Hot Spring ◽  
Sequencing Data ◽  
Short Read ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

Rubrobacter xylanophilus strain AA3-22, belonging to the phylum Actinobacteria, was isolated from nonvolcanic Arima Onsen (hot spring) in Japan. Here, we report the complete genome sequence of this organism, which was obtained by combining Oxford Nanopore long-read and Illumina short-read sequencing data.

scholarly journals Complete Genome Sequence of the Plant Pathogen Ralstonia solanacearum Strain CIAT-078, Isolated in Colombia, Obtained Using Oxford Nanopore Technology

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Diana López-Alvarez ◽  
Ana M. Leiva ◽  
Israel Barrantes ◽  
Juan M. Pardo ◽  
Viviana Dominguez ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Plant Pathogen ◽  
Ralstonia Solanacearum ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Causal Agent ◽  
Content Type ◽  
Solanacearum Strain ◽  
Oxford Nanopore

ABSTRACT Moko is one of the main diseases affecting banana and plantain in Colombia. Here, we report the genome sequence of the causal agent, the bacterium Ralstonia solanacearum (Smith) strain CIAT-078, collected in 2004 from affected plantains in central-west Colombia. The assembled genome was obtained using Oxford Nanopore Technology.

scholarly journals Complete Genome Sequence of Streptomyces lunaelactis MM109T, Isolated from Cave Moonmilk Deposits

2018 ◽  
Vol 6 (21) ◽  
Author(s):  
Aymeric Naômé ◽  
Marta Maciejewska ◽  
Magdalena Calusinska ◽  
Loïc Martinet ◽  
Sinaeda Anderssen ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Illumina Hiseq ◽  
Linear Chromosome ◽  
Content Type ◽  
Oxford Nanopore

ABSTRACT Streptomyces lunaelactis MM109T is a ferroverdin A (anticholesterol) producer isolated from cave moonmilk deposits. The complete genome sequence of MM109T was obtained by combining Oxford Nanopore MinION and Illumina HiSeq and MiSeq technologies, revealing an 8.4-Mb linear chromosome and two plasmids, pSLUN1 (127,264 bp, linear) and pSLUN2 (46,827 bp, circular).

scholarly journals Complete Genome Sequence of Pasteurella multocida HuN001, a Capsular Type A Strain from a Human

2021 ◽  
Vol 10 (26) ◽  
Author(s):  
Lin Lin ◽  
Chunhui Li ◽  
Fei Wang ◽  
Xueying Wang ◽  
Yue Zhang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Pasteurella Multocida ◽  
Sputum Sample ◽  
Capsular Type ◽  
Circular Chromosome ◽  
Content Type ◽  
Oxford Nanopore ◽  
Oxford Nanopore Technologies

Here, we report the complete genome sequence of clinical Pasteurella multocida strain HuN001, which was cultured from a sputum sample from a patient with pneumonia. Oxford Nanopore Technologies sequencing provided a complete genome sequence of P. multocida HuN001, which contains a 2,287,216-bp circular chromosome with an average G+C content of 40.33%.

scholarly journals Complete Genome Sequence of Vibrio rotiferianus Strain AM7

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Apirak Wiseschart ◽  
Kusol Pootanakit ◽  
Kei Kitahara
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The Novel ◽  
Sequencing Data ◽  
Short Read ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

ABSTRACT We isolated the novel strain Vibrio rotiferianus AM7 from the shell of an abalone. In this article, we report the complete genome sequence of this organism, which was obtained by combining Oxford Nanopore long-read and Illumina short-read sequencing data.

scholarly journals Complete Genome Sequence of Vibrio campbellii DS40M4

2019 ◽  
Vol 8 (4) ◽  
Author(s):  
Sophie M. Colston ◽  
W. Judson Hervey ◽  
W. Connor Horne ◽  
Margo G. Haygood ◽  
Blake D. Petersen ◽  
...  
Keyword(s):  
Genetic Structure ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gene Arrangement ◽  
Draft Assembly ◽  
Content Type ◽  
Oxford Nanopore ◽  
Vibrio Campbellii

We present the complete genome sequence of Vibrio campbellii DS40M4, assembled from Illumina and Oxford Nanopore data. This effort improves upon a previous draft assembly to resolve this organism’s two-chromosome and one-plasmid genetic structure and to provide valuable context for evaluating the gene arrangement and evolution of this species.

scholarly journals Complete Genome Sequence of Staphylococcus arlettae Strain P2, Isolated from a Laboratory Environment

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Hiroki Yu ◽  
Makoto Taniguchi ◽  
Kazuma Uesaka ◽  
Apirak Wiseschart ◽  
Kusol Pootanakit ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Hybrid Approach ◽  
Illumina Miseq ◽  
Sequencing Data ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

Staphylococcus arlettae is one coagulase-negative species in the bacterial genus Staphylococcus. Here, we describe the closed complete genome sequence of S. arlettae strain P2, which was obtained using a hybrid approach combining Oxford Nanopore long-read and Illumina MiSeq short-read sequencing data.

scholarly journals Complete Genome Sequence of Peptacetobacter (Clostridium) hiranonis Strain DGF055142, Isolated from Dog Feces from Flagstaff, Arizona, USA, 2019

2021 ◽  
Vol 10 (9) ◽  
Author(s):  
Nathan E. Stone ◽  
Amalee E. Nunnally ◽  
Chandler C. Roe ◽  
Heidie M. Hornstra ◽  
David M. Wagner ◽  
...  
Keyword(s):  
Clostridium Difficile ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Illumina Miseq ◽  
Single Chromosome ◽  
Content Type ◽  
Long Reads ◽  
Oxford Nanopore ◽  
Infection Resistance

ABSTRACT A single-chromosome closed genome of Peptacetobacter (Clostridium) hiranonis strain DGF055142 was generated using Illumina MiSeq short reads paired with Oxford Nanopore MinION long reads. This isolate was obtained from a canine in Flagstaff, Arizona, in 2019. Peptacetobacter (C.) hiranonis was hypothesized to contribute to canine Clostridium difficile infection resistance.

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