scholarly journals The Archaeal Transcription Termination Factor aCPSF1 is a Robust Phylogenetic Marker for Archaeal Taxonomy

Author(s):  
Jie Li ◽  
Xiaowei Zheng ◽  
Lingyan Li ◽  
Shengjie Zhang ◽  
Mifang Ren ◽  
...  

Archaea represent a unique type of prokaryote, which inhabit in various environments including extreme environments, and so define the boundary of biosphere, and play pivotal ecological roles, particularly in extreme environments. Since their discovery over 40 years ago, environmental archaea have been widely investigated using the 16S rRNA sequence comparison, and the recently developed phylogenomic approach because the majority of archaea are recalcitrant to laboratory cultivation.

Cell ◽  
1993 ◽  
Vol 75 (1) ◽  
pp. 147-154 ◽  
Author(s):  
Mikhail Kashlev ◽  
Evgeny Nudler ◽  
Alex Goldfarb ◽  
Terry White ◽  
Elizabeth Kutter

1999 ◽  
Vol 112 (19) ◽  
pp. 3259-3268 ◽  
Author(s):  
V. Sirri ◽  
P. Roussel ◽  
D. Hernandez-Verdun

The transcription termination factor TTF-1 exerts two functions in ribosomal gene (rDNA) transcription: facilitating initiation and mediating termination of transcription. Using HeLa cells, we show that TTF-1 protein is colocalized with the active transcription machinery in the nucleolus and also with the inactive machinery present in certain mitotic nucleolar organizer regions (NORs) when rDNA transcription is repressed. We also show that TTF-1 is specifically phosphorylated during mitosis in a manner dependent on the cdc2-cyclin B kinase pathway and on an okadaic acid-sensitive phosphatase. Interestingly, the mitotically phosphorylated form of TTF-1 appearing at the G(2)/M transition phase was more easily solubilized than was the interphase form. This indicates that the chromatin-binding affinity of TTF-1 appears to be different in mitotic chromosomes compared to the interphase nucleolus. Correlated with this, the other DNA-binding factor, UBF, which interferes with chromatin conformation in the rDNA promoter, was more strongly bound to rDNA during mitosis than at interphase. The reorganization of the mitotic rDNA promoter might be induced by phosphorylation of certain components of the rDNA transcription machinery and participate in silencing of rDNA during mitosis.


1999 ◽  
Vol 3 (4) ◽  
pp. 487-493 ◽  
Author(s):  
Cynthia E. Bogden ◽  
Deborah Fass ◽  
Nick Bergman ◽  
Matthew D. Nichols ◽  
James M. Berger

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