scholarly journals Parallelization of All-Pairs-Shortest-Path Algorithms in Unweighted Graph

Author(s):  
Masahiro Nakao ◽  
Hitoshi Murai ◽  
Mitsuhisa Sato
2015 ◽  
Vol 14 (8) ◽  
pp. 5979-5986 ◽  
Author(s):  
Abdelfatah Aref Tamimi

While technological revolution has active role to the increase of computer information, growing computational capabilities of devices, and raise the level of knowledge abilities, and skills. Increase developments in science and technology. In graph used the shortest path algorithms for solving the shortest path problem. The shortest path can be single pair shortest path problem or all pairs shortest path problem. This paper discuss briefly the shortest path algorithms such as Dijkstra's algorithm, Bellman-Ford algorithm,Floyd- Warshall algorithm, and johnson's algorithm. It describes the previous algorithms for solving the shortest path problem. The goal of this paper is to investigate and comparison the impacts of different shortest path algorithms. The study shows that the efficiency varies among algorithms, helps to suggest which one of them ought to be used to solve a specific variant of the shortest path problem.


1997 ◽  
Vol 77 (1) ◽  
pp. 59-71 ◽  
Author(s):  
K. Han ◽  
Chandra N. Sekharan ◽  
R. Sridhar

2015 ◽  
Vol 85 ◽  
pp. 91-103 ◽  
Author(s):  
Hristo Djidjev ◽  
Guillaume Chapuis ◽  
Rumen Andonov ◽  
Sunil Thulasidasan ◽  
Dominique Lavenier

F1000Research ◽  
2019 ◽  
Vol 8 ◽  
pp. 1774 ◽  
Author(s):  
Julia A. Gustavsen ◽  
Shraddha Pai ◽  
Ruth Isserlin ◽  
Barry Demchak ◽  
Alexander R. Pico

RCy3 is an R package in Bioconductor that communicates with Cytoscape via its REST API, providing access to the full feature set of Cytoscape from within the R programming environment. RCy3 has been redesigned to streamline its usage and future development as part of a broader Cytoscape Automation effort. Over 100 new functions have been added, including dozens of helper functions specifically for intuitive data overlay operations. Over 40 Cytoscape apps have implemented automation support so far, making hundreds of additional operations accessible via RCy3. Two-way conversion with networks from \textit{igraph} and \textit{graph} ensures interoperability with existing network biology workflows and dozens of other Bioconductor packages. These capabilities are demonstrated in a series of use cases involving public databases, enrichment analysis pipelines, shortest path algorithms and more. With RCy3, bioinformaticians will be able to quickly deliver reproducible network biology workflows as integrations of Cytoscape functions, complex custom analyses and other R packages.


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