scholarly journals The study of protein recruitment to laser-induced DNA lesions can be distorted by photoconversion of the DNA binding dye Hoechst

F1000Research ◽  
2019 ◽  
Vol 8 ◽  
pp. 104
Author(s):  
Verena Hurst ◽  
Susan M. Gasser

A commonly used approach for assessing DNA repair factor recruitment in mammalian cells is to induce DNA damage with a laser in the UV or near UV range and follow the local increase of GFP-tagged proteins at the site of damage. Often these measurements are performed in the presence of the blue DNA dye Hoechst, which is used as a photosensitizer. However, a light-induced switch of Hoechst from a blue-light to a green-light emitter will give a false positive signal at the site of damage.  Thus, photoconversion signals must be subtracted from the overall green-light emission to determine true recruitment. Here we demonstrate the photoconversion effect and suggest control experiments to exclude false-positive results.

F1000Research ◽  
2019 ◽  
Vol 8 ◽  
pp. 104
Author(s):  
Verena Hurst ◽  
Susan M. Gasser

A common approach used to assess DNA repair factor binding in mammalian cells is to induce DNA damage with a UV laser and follow the movement of GFP-tagged proteins to the site of damage. Often these measurements are performed in the presence of the blue DNA intercalating dye Hoechst or DAPI, which is used to label nuclear DNA. A UV-induced switch of Hoechst and DAPI from a blue-light to a green-light emitter will give a false positive signal at the site of damage.  Thus, photoconversion signals must be subtracted from the overall green-light emission to determine true recruitment. Here we demonstrate the photoconversion effect and suggest control experiments to exclude false-positive results.


2021 ◽  
Vol 119 (24) ◽  
pp. 241103
Author(s):  
Miao Wang ◽  
Yu Lin ◽  
Jue-Min Yi ◽  
De-Yao Li ◽  
Jian-Ping Liu ◽  
...  

1998 ◽  
Vol 27 (9) ◽  
pp. 909-910 ◽  
Author(s):  
Haipeng Zheng ◽  
Ruifeng Zhang ◽  
Ying Wu ◽  
Jiacong Shen

APL Materials ◽  
2020 ◽  
Vol 8 (7) ◽  
pp. 071115 ◽  
Author(s):  
Jintian Jiang ◽  
Daoyuan Wang ◽  
Mingfang Wu ◽  
Ping Peng ◽  
Fang-Fang Li ◽  
...  

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