scholarly journals Research Collaboration and Authorship Pattern in the field of Semantic Digital Libraries

2020 ◽  
Vol 40 (06) ◽  
pp. 375-381
Author(s):  
Shriram Pandey ◽  
Sidhartha Sahoo
Keyword(s):  
Computational Linguistics ◽  
Language Processing ◽  
Digital Libraries ◽  
Information Science ◽  
Research Collaboration ◽  
Processing System ◽  
Future Research ◽  
Authorship Pattern ◽  
Natural Language Processing System ◽  
Number Of Publications

This study aims to explore research collaborations and authorship patterns in the field of semantic digital libraries(SDL). The data is extracted (N=2075) from the Scopus database using keywords related to semantic digital libraries by considering all types of publications during 1983-2019. The analysis of each document is based on the following scientometrics indicators: author productivity, degree of collaboration, collaboration index, collaboration coefficient and modified collaboration coefficient. Correlation matrices were also calculated and inferences drawn in terms of authors and publications. A network visualisation tool VOSviewer was used to present authorship correlation network strength and keyword mapping for a better insight into the emerging areas in the field of SDL. The resulting average degree of collaboration of 0.898 indicates that a large number of publications are multi-authored and that there is a higher level of collaborative research in the field of semantic digital libraries. Meghini C from the Institute of Information Science and Technologies, Italy has produced the highest number of research paper(n=18) whereas Egenhofer MJ found to be a profoundly impacted author with 851 citations on in the studied domain. Results also reveal that the focus areas of research related to SDL include digital libraries, semantic web, ontology, metadata and information retrieval. However, keywords such as natural language processing system, computational linguistics, linked data are also repeated frequently in the published literature, thus revealing the emerging areas of the future research in the domain of SDL.

scholarly journals Learning predictive models of drug side-effect relationships from distributed representations of literature-derived semantic predications

2018 ◽  
Vol 25 (10) ◽  
pp. 1339-1350 ◽  
Author(s):  
Justin Mower ◽  
Devika Subramanian ◽  
Trevor Cohen
Keyword(s):  
Machine Learning ◽  
Language Processing ◽  
Side Effect ◽  
Cross Validation ◽  
Processing System ◽  
Biomedical Literature ◽  
Supervised Machine Learning ◽  
Machine Learning Techniques ◽  
Drug Side Effect ◽  
Natural Language Processing System

Abstract Objective The aim of this work is to leverage relational information extracted from biomedical literature using a novel synthesis of unsupervised pretraining, representational composition, and supervised machine learning for drug safety monitoring. Methods Using ≈80 million concept-relationship-concept triples extracted from the literature using the SemRep Natural Language Processing system, distributed vector representations (embeddings) were generated for concepts as functions of their relationships utilizing two unsupervised representational approaches. Embeddings for drugs and side effects of interest from two widely used reference standards were then composed to generate embeddings of drug/side-effect pairs, which were used as input for supervised machine learning. This methodology was developed and evaluated using cross-validation strategies and compared to contemporary approaches. To qualitatively assess generalization, models trained on the Observational Medical Outcomes Partnership (OMOP) drug/side-effect reference set were evaluated against a list of ≈1100 drugs from an online database. Results The employed method improved performance over previous approaches. Cross-validation results advance the state of the art (AUC 0.96; F1 0.90 and AUC 0.95; F1 0.84 across the two sets), outperforming methods utilizing literature and/or spontaneous reporting system data. Examination of predictions for unseen drug/side-effect pairs indicates the ability of these methods to generalize, with over tenfold label support enrichment in the top 100 predictions versus the bottom 100 predictions. Discussion and Conclusion Our methods can assist the pharmacovigilance process using information from the biomedical literature. Unsupervised pretraining generates a rich relationship-based representational foundation for machine learning techniques to classify drugs in the context of a putative side effect, given known examples.

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