scholarly journals Nucleotide Variation, Linkage Disequilibrium and Founder-Facilitated Speciation in Wild Populations of the Zebra Finch (Taeniopygia guttata)

Genetics ◽  
2008 ◽  
Vol 181 (2) ◽  
pp. 645-660 ◽  
Author(s):  
Christopher N. Balakrishnan ◽  
Scott V. Edwards
The Condor ◽  
2001 ◽  
Vol 103 (1) ◽  
pp. 180-183 ◽  
Author(s):  
Thomas J. Maier ◽  
Richard M. Degraaf

Abstract Small mammals, such as mice and voles, have been implicated as major egg predators of Neotropical migrant passerines by field studies using soft plasticine eggs or the very small eggs of Zebra Finch (Taeniopygia guttata). Nevertheless, the effort required to depredate these commonly used egg surrogates may be less than that required to depredate the larger, thicker-shelled eggs of most passerine species. To compare the depredation of these surrogates to that of the eggs of a mid-sized passerine by a ubiquitous small predator, we exposed dissimilar pairs of plasticine, Zebra Finch, and House Sparrow (Passer domesticus) eggs to captive white-footed mice (Peromyscus leucopus). Plasticine eggs were marked by mice more than either kind of real egg, and Zebra Finch eggs were breached more often than House Sparrow eggs. We conclude that the use of either plasticine or Zebra Finch eggs may lead to overestimation of the ability or proclivity of small mammals to actually depredate the eggs of most passerines.


BMC Genomics ◽  
2010 ◽  
Vol 11 (1) ◽  
pp. 218 ◽  
Author(s):  
Alexander D Ball ◽  
Jessica Stapley ◽  
Deborah A Dawson ◽  
Tim R Birkhead ◽  
Terry Burke ◽  
...  

Genetics ◽  
1997 ◽  
Vol 145 (2) ◽  
pp. 311-323 ◽  
Author(s):  
Brent Richter ◽  
Manyuan Long ◽  
R C Lewontin ◽  
Eiji Nitasaka

A study of polymorphism and species divergence of the dpp gene of Drosophila has been made. Eighteen lines from a population of D. melanogaster were sequenced for 5200 bp of the Hin region of the gene, coding for the dpp polypeptide. A comparison was made with sequence from D. simulans. Ninety-six silent polymorphisms and three amino acid replacement polymorphisms were found. The overall silent polymorphism (0.0247) is low, but haplotype diversity (0.0066 for effectively silent sites and 0.0054 for all sites) is in the range found for enzyme loci. Amino acid variation is absent in the N-terminal signal peptide, the C-terminal TGF-β peptide and in the N-terminal half of the pro-protein region. At the nucleotide level there is strong conservation in the middle half of the large intron and in the 3′ untranslated sequence of the last exon. The 3′ untranslated conservation, which is perfect for 110 bp among all the divergent species, is unexplained. There is strong positive linkage disequilibrium among polymorphic sites, with stretches of apparent gene conversion among originally divergent sequences. The population apparently is a migration mixture of divergent clades.


2019 ◽  
Vol 193 ◽  
pp. 192-204 ◽  
Author(s):  
Melissah Rowe ◽  
Sheri Skerget ◽  
Matthew A. Rosenow ◽  
Timothy L. Karr

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