scholarly journals Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed

2005 ◽  
Vol 28 (4) ◽  
pp. 677-681 ◽  
Author(s):  
E. Gus Cothran ◽  
Rytis Juras ◽  
Vale Macijauskiene
Keyword(s):  
Mitochondrial Dna ◽  
Sequence Variation ◽  
Horse Breed ◽  
Loop Sequence ◽  
D Loop

scholarly journals Mitochondrial D-loop sequence variation among Hucul horse

2013 ◽  
Vol 58 (No. 10) ◽  
pp. 437-442 ◽  
Author(s):  
V. Czerneková ◽  
T. Kott ◽  
I. Majzlík
Keyword(s):  
Mitochondrial Dna ◽  
Genetic Information ◽  
Sequence Variation ◽  
Dna Typing ◽  
Conservation Strategies ◽  
Base Pairs ◽  
Horse Population ◽  
Loop Region ◽  
Loop Sequence ◽  
D Loop

Genetic variation in the Czech Hucul horse population was analyzed using a sequence analysis of the D-loop region of mitochondrial DNA. One hundred and sixty-five Hucul horses were tested. Sequencing of the 700-base pairs fragment of the mitochondrial DNA D-loop region revealed 38 mutation sites representing 14 haplotypes, which were clustered into six haplogroups. The genetic information obtained from the mitochondrial DNA typing is of utmost importance for the future breed-conservation strategies.  

Mitochondrial D-loop sequence variation among the 16 maternal lines of the Lipizzan horse breed

1999 ◽  
Vol 30 (6) ◽  
pp. 423-430 ◽  
Author(s):  
T Kavar ◽  
F Habe ◽  
G Brem ◽  
P Dovč
Keyword(s):  
Sequence Variation ◽  
Horse Breed ◽  
Loop Sequence ◽  
D Loop

Mitochondrial DNA D-loop sequence variation in maternal lineages of Iranian native horses

2012 ◽  
Vol 44 (2) ◽  
pp. 209-213 ◽  
Author(s):  
M. Moridi ◽  
A. A. Masoudi ◽  
R. Vaez Torshizi ◽  
E. W. Hill
Keyword(s):  
Mitochondrial Dna ◽  
Sequence Variation ◽  
Loop Sequence ◽  
D Loop

scholarly journals Sequence variation and structural conservation in the D-loop region and flanking genes of mitochondrial DNA from Japanese pond frogs.

2000 ◽  
Vol 75 (2) ◽  
pp. 79-92 ◽  
Author(s):  
Masayuki Sumida ◽  
Hideki Kaneda ◽  
Yoji Kato ◽  
Yasushi Kanamori ◽  
Hiromichi Yonekawa ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
Sequence Variation ◽  
Loop Region ◽  
D Loop ◽  
Structural Conservation

The Lusitano horse maternal lineage based on mitochondrial D-loop sequence variation

2005 ◽  
Vol 36 (3) ◽  
pp. 196-202 ◽  
Author(s):  
M. S. Lopes ◽  
D. Mendonça ◽  
T. Cymbron ◽  
M. Valera ◽  
J. da Costa-Ferreira ◽  
...  
Keyword(s):  
Sequence Variation ◽  
Maternal Lineage ◽  
Loop Sequence ◽  
D Loop

scholarly journals Variability of mitochondrial DNA D-loop sequences in Zabaikalskaya horse breed

2021 ◽  
Vol 25 (5) ◽  
pp. 486-491
Author(s):  
L. A. Khrabrova ◽  
N. V. Blohina ◽  
B. Z. Bazaron ◽  
T. N. Khamiruev
Keyword(s):  
Mitochondrial Dna ◽  
Hypervariable Region ◽  
Composite Likelihood ◽  
Dna Polymorphisms ◽  
Nucleotide Position ◽  
Horse Breed ◽  
Bootstrap Analysis ◽  
Genetic Characteristics ◽  
Hair Samples ◽  
D Loop

The Zabaikalskaya horse is an indigenous breed of horses from Siberia with diverse use. It is characterized by e durance and good adaptability to year-round herd maintenance in the harsh conditions of the Baikal steppes. To determine the genetic characteristics of the maternal lineage of the Zabaikalskaya horse breed based on mitochondrial DNA polymorphisms, we collected hair samples from 31 horses belonging to breeding farms in the Trans-Baikal Territory. Analysis of the 530 bp sequence of the mtDNA D-loop was performed using the maximum composite likelihood (MCL) model in combination with bootstrap analysis. When studying the polymorphism of the hypervariable region of the mtDNA D-loop in Zabaikalskaya horses, we identified 31 haplotypes representing 8 haplogroups: B, C, G, H, L, M, Q and R according to modern classification. The sequenced fragment of the D-loop from nucleotide position 15471 to 16000 contained 17 polymorphic sites, mainly represented by the A→G, G→A and T→C transitions. The haplogroups Q (25.81 %), B (19.35 %), G (16.13 %) and H (12.90 %) were prevailing in the mtDNA structure of this breed. Genetic analysis of the mitochondrial genome of the Zabaikalskaya horse revealed a high level of diversity of haplotypes and haplogroups, which are typical for the horse populations of Eurasia.

scholarly journals Mitochondrial D-loop sequence variation among Central Javanese Duck in Indonesia

2017 ◽  
Vol 39 (4) ◽  
pp. 449 ◽  
Author(s):  
R Susanti ◽  
Retno Sri Iswari ◽  
Fidia Fibriana ◽  
Retno Ika Sari
Keyword(s):  
Sequence Variation ◽  
Loop Sequence ◽  
D Loop
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