scholarly journals Fluorescence Titrations to Determine the Binding Affinity of Cyclic Nucleotides to SthK Ion Channels

BIO-PROTOCOL ◽  
2018 ◽  
Vol 8 (19) ◽  
Author(s):  
Philipp Schmidpeter ◽  
Crina Nimigean
ChemBioChem ◽  
2020 ◽  
Vol 21 (16) ◽  
pp. 2311-2320
Author(s):  
Marco Lelle ◽  
Maik Otte ◽  
Michele Bonus ◽  
Holger Gohlke ◽  
Klaus Benndorf

2013 ◽  
Vol 2013 ◽  
pp. 1-10 ◽  
Author(s):  
Riccardo Montioli ◽  
Barbara Cellini ◽  
Mirco Dindo ◽  
Elisa Oppici ◽  
Carla Borri Voltattorni

Human Dopa decarboxylase (hDDC), a pyridoxal 5′-phosphate (PLP) enzyme, displays maxima at 420 and 335 nm and emits fluorescence at 384 and 504 nm upon excitation at 335 nm and at 504 nm when excited at 420 nm. Absorbance and fluorescence titrations of hDDC-bound coenzyme identify a singlepKspecof ~7.2. ThispKspeccould not represent the ionization of a functional group on the Schiff base but that of an enzymic residue governing the equilibrium between the low- and the high-pH forms of the internal aldimine. During the reaction of hDDC with L-Dopa, monitored by stopped-flow spectrophotometry, a 420 nm band attributed to the 4′-N-protonated external aldimine first appears, and its decrease parallels the emergence of a 390 nm peak, assigned to the 4′-N-unprotonated external aldimine. The pH profile of the spectral change at 390 nm displays a pK of 6.4, a value similar to that (~6.3) observed in bothkcatandkcat/Kmprofiles. This suggests that this pK represents the ESH+→ ES catalytic step. The assignment of the pKs of 7.9 and 8.3 observed on the basic side ofkcatand the PLP binding affinity profiles, respectively, is also analyzed and discussed.


2015 ◽  
Vol 291 (1) ◽  
pp. 371-381 ◽  
Author(s):  
Hannah A. DeBerg ◽  
Peter S. Brzovic ◽  
Galen E. Flynn ◽  
William N. Zagotta ◽  
Stefan Stoll

The Neuron ◽  
2015 ◽  
pp. 295-326
Author(s):  
Irwin B. Levitan ◽  
Leonard K. Kaczmarek

Sensory cells have evolved pathways that allow ion channels to be regulated by external stimuli such as movement, light, or chemicals. In some cases, such as in photoreceptors and olfactory and taste receptors, the means by which the external stimulus is transduced is reasonably well understood. Such cells appear to handle information in ways similar to those used by neurons that deal with information coming from a presynaptic pathway, by altering the levels of second messengers such as cyclic nucleotides, which then open or close ion channels in the plasma membrane. In contrast, in mechanoreceptors, which include touch receptors and hair cells of the cochlea that are required for hearing, movement is directly linked to the gating of ion channels.


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