Faculty Opinions recommendation of Local chromatin environment of a Polycomb target gene instructs its own epigenetic inheritance.

Author(s):  
Ho-Ryun Chung
eLife ◽  
2015 ◽  
Vol 4 ◽  
Author(s):  
Scott Berry ◽  
Matthew Hartley ◽  
Tjelvar S G Olsson ◽  
Caroline Dean ◽  
Martin Howard

Inheritance of gene expression states is fundamental for cells to ‘remember’ past events, such as environmental or developmental cues. The conserved Polycomb Repressive Complex 2 (PRC2) maintains epigenetic repression of many genes in animals and plants and modifies chromatin at its targets. Histones modified by PRC2 can be inherited through cell division. However, it remains unclear whether this inheritance can direct long-term memory of individual gene expression states (cis memory) or instead if local chromatin states are dictated by the concentrations of diffusible factors (trans memory). By monitoring the expression of two copies of the Arabidopsis Polycomb target gene FLOWERING LOCUS C (FLC) in the same plants, we show that one copy can be repressed while the other is active. Furthermore, this ‘mixed’ expression state is inherited through many cell divisions as plants develop. These data demonstrate that epigenetic memory of FLC expression is stored not in trans but in cis.


Author(s):  
Scott Berry ◽  
Matthew Hartley ◽  
Tjelvar S G Olsson ◽  
Caroline Dean ◽  
Martin Howard

2021 ◽  
Author(s):  
Adelheid Lempradl ◽  
Unn Kugelberg ◽  
Mary Iconomou ◽  
Ian Beddows ◽  
Daniel Nätt ◽  
...  

Preconception parental environment can reproducibly program offspring phenotype without altering the DNA sequence, yet the mechanisms underpinning this epigenetic inheritance remains elusive. Here, we demonstrate the existence of an intact piRNA-pathway in mature Drosophila sperm and show that pathway modulation alters offspring gene transcription in a sequence-specific manner. We map a dynamic small RNA content in developing sperm and find that the mature sperm carry a highly distinct small RNA cargo. By biochemical pulldown, we identify a small RNA subset bound directly to piwi protein. And, we show that piRNA-pathway controlled sperm small RNAs are linked to target gene repression in offspring. Critically, we find that full piRNA-pathway dosage is necessary for the intergenerational metabolic and transcriptional reprogramming events triggered by high paternal dietary sugar. These data provide a direct link between regulation of endogenous mature sperm small RNAs and transcriptional programming of complementary sequences in offspring. Thus, we identify a novel mediator of paternal intergenerational epigenetic inheritance.


2012 ◽  
Vol 40 (13) ◽  
pp. 5848-5863 ◽  
Author(s):  
Jia Zeng ◽  
Brian D. Kirk ◽  
Yufeng Gou ◽  
Qinghua Wang ◽  
Jianpeng Ma

2011 ◽  
Vol 65 (6) ◽  
pp. 872-881 ◽  
Author(s):  
Diana Mihaela Buzas ◽  
Masumi Robertson ◽  
E. Jean Finnegan ◽  
Chris A. Helliwell

PLoS Genetics ◽  
2019 ◽  
Vol 15 (1) ◽  
pp. e1007932 ◽  
Author(s):  
Mary Leatham-Jensen ◽  
Christopher M. Uyehara ◽  
Brian D. Strahl ◽  
A. Gregory Matera ◽  
Robert J. Duronio ◽  
...  

2014 ◽  
Vol 54 (5) ◽  
pp. 777-790 ◽  
Author(s):  
Nadya Dimitrova ◽  
Jesse R. Zamudio ◽  
Robyn M. Jong ◽  
Dylan Soukup ◽  
Rebecca Resnick ◽  
...  

2012 ◽  
Vol 5 (1) ◽  
pp. 12 ◽  
Author(s):  
Peggy Prickaerts ◽  
Hanneke EC Niessen ◽  
Emmanuèle Mouchel-Vielh ◽  
Vivian EH Dahlmans ◽  
Guus GH van den Akker ◽  
...  

2014 ◽  
Vol 56 ◽  
pp. 207-219 ◽  
Author(s):  
Chi L.L. Pham ◽  
Ann H. Kwan ◽  
Margaret Sunde

Amyloids are insoluble fibrillar protein deposits with an underlying cross-β structure initially discovered in the context of human diseases. However, it is now clear that the same fibrillar structure is used by many organisms, from bacteria to humans, in order to achieve a diverse range of biological functions. These functions include structure and protection (e.g. curli and chorion proteins, and insect and spider silk proteins), aiding interface transitions and cell–cell recognition (e.g. chaplins, rodlins and hydrophobins), protein control and storage (e.g. Microcin E492, modulins and PMEL), and epigenetic inheritance and memory [e.g. Sup35, Ure2p, HET-s and CPEB (cytoplasmic polyadenylation element-binding protein)]. As more examples of functional amyloid come to light, the list of roles associated with functional amyloids has continued to expand. More recently, amyloids have also been implicated in signal transduction [e.g. RIP1/RIP3 (receptor-interacting protein)] and perhaps in host defence [e.g. aDrs (anionic dermaseptin) peptide]. The present chapter discusses in detail functional amyloids that are used in Nature by micro-organisms, non-mammalian animals and mammals, including the biological roles that they play, their molecular composition and how they assemble, as well as the coping strategies that organisms have evolved to avoid the potential toxicity of functional amyloid.


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