scholarly journals Extracting Time-Frequency Features of Images for Robust LSTM-based Classification of H&E Stained Tissue

Author(s):  
Tuan Pham

The importance of automated classification of histopathological images has been increasingly recognized for effective processing of large volumes of data in the era of digital pathology for new discovery of disease mechanism. This paper presents a deep-learning approach that extracts time-frequency features of H&E stained tissue images for classification by long short-term memory networks. Using two large public databases of colorectal-cancer and heart-failure H&E stained tissue images, the proposed approach outperforms several state-of-the-art benchmark classification methods, including support vector machines and convolutional neural networks in terms of several statistical measures.

2020 ◽  
Author(s):  
Tuan Pham

The importance of automated classification of histopathological images has been increasingly recognized for effective processing of large volumes of data in the era of digital pathology for new discovery of disease mechanism. This paper presents a deep-learning approach that extracts time-frequency features of H&E stained tissue images for classification by long short-term memory networks. Using two large public databases of colorectal-cancer and heart-failure H&E stained tissue images, the proposed approach outperforms several state-of-the-art benchmark classification methods, including support vector machines and convolutional neural networks in terms of several statistical measures.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Tuan D. Pham

AbstractImage analysis in histopathology provides insights into the microscopic examination of tissue for disease diagnosis, prognosis, and biomarker discovery. Particularly for cancer research, precise classification of histopathological images is the ultimate objective of the image analysis. Here, the time-frequency time-space long short-term memory network (TF-TS LSTM) developed for classification of time series is applied for classifying histopathological images. The deep learning is empowered by the use of sequential time-frequency and time-space features extracted from the images. Furthermore, unlike conventional classification practice, a strategy for class modeling is designed to leverage the learning power of the TF-TS LSTM. Tests on several datasets of histopathological images of haematoxylin-and-eosin and immunohistochemistry stains demonstrate the strong capability of the artificial intelligence (AI)-based approach for producing very accurate classification results. The proposed approach has the potential to be an AI tool for robust classification of histopathological images.


PLoS ONE ◽  
2012 ◽  
Vol 7 (2) ◽  
pp. e32441 ◽  
Author(s):  
Laurence O'Dwyer ◽  
Franck Lamberton ◽  
Arun L. W. Bokde ◽  
Michael Ewers ◽  
Yetunde O. Faluyi ◽  
...  

Author(s):  
Carlos M. Travieso ◽  
Jesús B. Alonso ◽  
Miguel A. Ferrer ◽  
Jorge Corsino

In the present chapter, the authors have developed a tool for the automatic arrhythmias detection, based on time-frequency features and using a Support Vector Machines (SVM) as classifier. Arrhythmia Database Massachusetts Institute of Technology (MIT) has been used in the work in order to detect eight different states, seven are pathologies and one is normal. The unions of different blocks and its optimization have found success rates of 99.82% for RR’ interval detection from electrocardiogram (PQRST waves), and 99.23% for pathologic detection. In particular, the authors have used wavelet transform in order to characterize the wave of electrocardiogram (ECG), based on Biorthogonal family, achieving the most discriminative coefficients. A discussion on arrhythmia ECG classification methods is also presented in this paper.


2008 ◽  
Vol 21 (1) ◽  
pp. 92-101 ◽  
Author(s):  
Holger Fröhlich ◽  
Andreas Hoenselaar ◽  
Jonas Eichner ◽  
Holger Rosenbrock ◽  
Gerald Birk ◽  
...  

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