scholarly journals Ecological data in Darwin Core: the case of earthworm surveys

2021 ◽  
Vol 9 ◽  
Author(s):  
Maxim Shashkov ◽  
Natalya Ivanova ◽  
John Wieczorek

This sampling-event dataset provides primary data about species diversity, age structure, abundance (in terms of biomass and density) and seasonal activity of earthworms (Lumbricidae). The study was carried out in old-growth broad-leaved and young forests of two protected areas ("Kaluzhskiye Zaseki" Nature Reserve and Ugra National Park) of Kaluga Oblast (Russia). The published dataset provides new data about earthworm communities in European Russia. We propose a new schema according to Darwin Core for the standardisation of the soil invertebrates survey data.

2020 ◽  
Vol 8 ◽  
Author(s):  
Maxim Shashkov ◽  
Sergei Alexeev ◽  
Natalya Ivanova

This sampling-event dataset provides primary data about species diversity, population and seasonal activity of ground beetles (Carabidae, Coleoptera). The study was carried out in broad-leaved forests of protected ("Kaluzhskiye Zaseki" Nature Reserve and Ugra National Park) and urban areas (the Kaluga City) of the Kaluga Oblast. Carabids were collected from April to October during 1995-1998 by pitfall traps. In total, 108,000 adult individuals of the Carabidae family were sampled; 105 species from 38 genera were counted. This dataset is the first sampling-event dataset about the Carabidae family for the European part of Russia. It provides biodiversity data for new territory (Kaluga Oblast) and contributes to filling gaps in the global biodiversity distribution of the Carabidae family. Part of the data was collected from unique old-growth broad-leaved forests.


2021 ◽  
Vol 918 (1) ◽  
pp. 012052
Author(s):  
K F Fatlan ◽  
P Pamoengkas ◽  
M Majiidu ◽  
I Z Siregar

Abstract Ebony (Diospyros celebica Bakh.) is endemic species to Sulawesi that is experiencing population decline. It is known that population size is an important element for the dynamics of natural forests through changes in vegetation structure and composition that need to be monitored. This study aims to analyze the species diversity in natural habitats of genetically diverse ebony, namely: i) Bantimurung National Park (BB), ii) Cani Sirenreng Nature Park (CS), iii) Farhumpenai Nature Reserve (FP), and iv) Pangi Binangga Nature Reserve (PB). Data collection was carried out based on a modified transect line and plot with 20 m x 100 m in size. The results showed that as many as 28 families were identified, consisting of 44 species at the tree level, 37 species at the pole level, 39 species at the sapling level, and 31 species at the seedling level, respectively. The composition of vegetation in Babul National Park consists of 32 species, Cani Sirenreng consists of 18 species, Farhumpenai consists of 19 species, and Pangi Binanngga consists of 19 species. The species composition was dominated by Diospyros celebica Bakh., Dracontomelon dao (Blanco) Merr. & Rolfe, Canangium odoratum, Ficus benjamina L., Pterospermum celebicum Miq., Kleinhovia hospita L. and Vitex cofassus Reinw. Ex Blume. The diversity index (H’-Index) of tree species in BB, CS, FP, and PB were 0.82, 1.13, 1.03, and 1.60, respectively. The Important Value Index (INP-Index) of ebony in BB, CS, FP and PB were 18.01%, 74.1%, 60.13% and 113.5%, respectively. The structure of the forest canopy layer in BB and FP consists of three layers of canopy, while CS and PB consist of two layers of canopy.


Author(s):  
Karol Torzewski

The paper presents the results of field research on the occurrence of Succisella inflexa in Kampinos National Park, conducted in 2004–2015. Its stations are characterized and its distribution is given. The populations were mainly concentrated in the eastern part of the park. Forty-five stations have been reported, two of them most likely historical. They were most often in open sedge and meadow, and less frequently in thin shrub and young forests. The population sizes ranged from single specimens to many thousands.


Paleobiology ◽  
2021 ◽  
Vol 47 (2) ◽  
pp. 171-177
Author(s):  
James C. Lamsdell ◽  
Curtis R. Congreve

The burgeoning field of phylogenetic paleoecology (Lamsdell et al. 2017) represents a synthesis of the related but differently focused fields of macroecology (Brown 1995) and macroevolution (Stanley 1975). Through a combination of the data and methods of both disciplines, phylogenetic paleoecology leverages phylogenetic theory and quantitative paleoecology to explain the temporal and spatial variation in species diversity, distribution, and disparity. Phylogenetic paleoecology is ideally situated to elucidate many fundamental issues in evolutionary biology, including the generation of new phenotypes and occupation of previously unexploited environments; the nature of relationships among character change, ecology, and evolutionary rates; determinants of the geographic distribution of species and clades; and the underlying phylogenetic signal of ecological selectivity in extinctions and radiations. This is because phylogenetic paleoecology explicitly recognizes and incorporates the quasi-independent nature of evolutionary and ecological data as expressed in the dual biological hierarchies (Eldredge and Salthe 1984; Congreve et al. 2018; Fig. 1), incorporating both as covarying factors rather than focusing on one and treating the other as error within the dataset.


Koedoe ◽  
1998 ◽  
Vol 41 (1) ◽  
Author(s):  
K.N. De Kock ◽  
C.T. Wolmarans

Most of the previous records of the freshwater molluscs from the Kruger National Park date back prior to and up to 1966. On account of several droughts between 1966 and 1995 it was decided to do a survey of the freshwater mollusc population in 1995 to evaluate the effect of these droughts. The traditional mollusc intermediate hosts were also screened for trematode parasites to establish whether or not they were infected. No infected molluscs were found. Eight of the 19 species reported up to 1966 were not found during the 1995 survey. Three new mollusc species were collected in 1995. The consequences of the drought are clearly visible when the species diversity found in the dams in the 1995 survey, is compared to what was previously recorded.


Copeia ◽  
1991 ◽  
Vol 1991 (2) ◽  
pp. 294 ◽  
Author(s):  
George H. Dalrymple ◽  
Todd M. Steiner ◽  
Robert J. Nodell ◽  
Frank S. Bernardino

Phytotaxa ◽  
2016 ◽  
Vol 280 (3) ◽  
pp. 241 ◽  
Author(s):  
CAROLINA ANGÉLICA ARAÚJO DE AZEVEDO ◽  
VALÉRIA CASSANO ◽  
MARIANA CABRAL OLIVEIRA

Phylogenetic relationships and species diversity within the genus Halymenia along the Brazilian coast were investigated through molecular and morphological analyses. Molecular studies included UPA, COI-5P and rbcL markers. A total of five Halymenia species were found: Halymenia cearensis sp. nov., H. ignifera, H. pinnatifida, H. silviae and H. cf. mirabilis. Halymenia cearensis was molecularly distinct from all other Halymenia species included in this study and is morphologically characterized by: cleft, lobate, oblong or obovate blades with broad base; apex irregular in shape; surface with bullations, rugosities, spiny and globular papillae irregularly distributed; abundant and conspicuous ganglionic cells throughout; blades up to 800 µm thick at base; outer cortical cells ellipsoidal or ovoid in shape, higher than broad; and inner cortex cells 4–25 µm in width. Our phylogeny demonstrated that entities attributed to H. floridana and H. elongata occurring in Brazil correspond to two distinct genera, which was also supported by morphological and ecological data. The use of molecular tools was crucial to provide a better understanding of the diversity of Brazilian marine flora.


2021 ◽  
Vol 55 (2) ◽  
pp. 361-377
Author(s):  
N. I. Borzov ◽  
F. M. Bortnikov ◽  
A. V. Matveev ◽  
V. I. Gmoshinskiy

The results of the first study of the species diversity of myxomycetes of the Rdeysky State Nature Reserve are presented. The 201 field specimens of sporophores belonging to 56 morphospecies from 27 genera, ten families, and six orders were collected from September 30 to October 5, 2020. Fifty-two species of these were new for the Novgorod Region. The most common species at the reserve were Arcyria affinis, Hemitrichia calyculata, Lycogala epidendrum, Metatrichia vesparia, Physarum album, Trichia decipiens, and T. varia. Additionally, detailed morphological descriptions of two rare species Amaurochaete trechispora and Trichia crateriformis are given.


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