scholarly journals A new cryptic species of Hyphessobrycon Durbin, 1908 (Characiformes, Characidae) from the Eastern Amazon, revealed by integrative taxonomy

2019 ◽  
Vol 95 (2) ◽  
pp. 345-360 ◽  
Author(s):  
Erick Cristofore Guimarães ◽  
Pâmella Silva de Brito ◽  
Leonardo Manir Feitosa ◽  
Luis Fernando Carvalho Costa ◽  
Felipe Polivanov Ottoni
Keyword(s):  
New Species ◽  
Cryptic Species ◽  
Mitochondrial Gene ◽  
Molecular Data ◽  
Color Pattern ◽  
Integrative Taxonomy ◽  
The Body ◽  
Phylogenetic Position ◽  
Species Complexes ◽  
Molecular Phylogenetic

Hyphessobryconcarusp. nov. is described based on five different and independent methods of species delimitation, making the hypothesis of this new species supported by an integrative taxonomy perspective. This new species has a restricted distribution, occurring just in the upper Pindaré river drainage, Mearim river basin, Brazil. It is a member of the rosy tetra clade, which is characterized mainly by the presence of a dark brown or black blotch on dorsal fin and absence of a midlateral stripe on the body. Hyphessobryconcarusp. nov. is distinguished from the members of this clade mainly by the shape of its humeral spot, possessing few irregular inconspicuous vertically arranged chromatophores in the humeral region, or sometimes a very thin and inconspicuous humeral spot, and other characters related to teeth count, and color pattern. The phylogenetic position of the new species within the rosy tetra clade was based on molecular phylogenetic analysis using sequences of the mitochondrial gene cytochrome oxidase subunit 1. In addition, a new clade (here termed Hyphessobryconmicropterus clade) within the rosy tetra clade is proposed based on molecular data, comprising H.carusp. nov., H.micropterus, H.piorskii, and H.simulatus, and with H.carusp. nov. and H.piorskii recovered as sister species. Our results suggest cryptic speciation in the rosy tetra clade and, more specifically, in the H.micropterus clade. We recommend the use of integrative taxonomy for future taxonomic revisions and species descriptions when dealing with species complexes and groups containing possible cryptic species.

scholarly journals Integrative taxonomy reveals two new cryptic species of Hyphessobrycon Durbin, 1908 (Teleostei: Characidae) from the Maracaçumé and middle Tocantins River basins, Eastern Amazon region

2020 ◽  
Vol 723 ◽  
pp. 77-107
Author(s):  
Erick Cristofore Guimarães ◽  
Pâmella Silva De Brito ◽  
Pedro Henrique Negreiros Bragança ◽  
Jadson Pinheiro Santos ◽  
Axel Makay Katz ◽  
...  
Keyword(s):  
New Species ◽  
Mitochondrial Gene ◽  
Morphological Characters ◽  
Molecular Data ◽  
Color Pattern ◽  
Integrative Taxonomy ◽  
The Body ◽  
Dorsal Fin ◽  
Two New Species ◽  
Molecular Phylogenetic

Two new species, Hyphessobrycon frickei Guimarães, Brito, Bragança, Katz & Ottoni sp. nov. and H. geryi Guimarães, Brito, Bragança, Katz & Ottoni sp. nov., are herein described, based on seven different and independent species delimitation methods, and on molecular and morphological characters, making the hypothesis of these new species supported from an integrative taxonomy perspective. They belong to the “Rosy tetra” clade, which is mainly characterized by the presence of a dark brown or black blotch on the dorsal fin and the absence of a midlateral stripe on the body. These two new species are distinguished from the other members of this clade mainly by the arrangement, shape and color pattern of humeral and dorsal-fin spots, as well as by other characters related to scale counts and body pigmentation. The placement of the new species within the “Rosy tetra” clade was based on the combination of morphological character states mentioned above and corroborated by a molecular phylogenetic analysis using the mitochondrial gene cytochrome oxidase subunit 1. In addition, a new clade (here termed Hyphessobrycon copelandi clade) within the “Rosy tetra” clade is proposed based on molecular data, comprising H. copelandi, H. frickei sp. nov., H. geryi sp. nov. and a still undescribed species. Our results corroborate the occurrence of hidden species within the “Rosy tetra” clade, as suggested by previous studies.

Integrative taxonomy of the Asian skinks Sphenomorphus stellatus (Boulenger, 1900) and S. praesignis (Boulenger, 1900) with the resurrection of S. annamiticus (Boettger, 1901) and the description of a new species from Cambodia

Zootaxa ◽  
2019 ◽  
Vol 4683 (3) ◽  
pp. 381-411 ◽  
Author(s):  
L. LEE GRISMER ◽  
PERRY L., JR. WOOD ◽  
EVAN S. H. QUAH ◽  
SHAHRUL ANUAR ◽  
NIKOLAY A. POYARKOV ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Color Pattern ◽  
Integrative Taxonomy ◽  
Peninsular Malaysia ◽  
Wildlife Sanctuary ◽  
Molecular Phylogenetic ◽  
Univariate Analyses ◽  
A New Species

Molecular phylogenetic analyses of the sister species Sphenomorphus stellatus and S. praesignis based on the mitochondrial genes 12S and 16S rRNA recover the former as paraphyletic with respect to the latter in that a specimen of S. stellatus from the type locality in Peninsular Malaysia is more closely related to S. praesignis than to Indochinese populations of S. stellatus. Furthermore, the phylogeny indicates that the Indochinese populations represent two species, thus resulting in four major lineages within this clade. These relationships are consistent with multivariate and univariate analyses of morphological and discrete color pattern data which statistically define and diagnose the four lineages and together with the molecular data, provide the foundation for robust, testable, species-level hypotheses. As such, S. stellatus is herein restricted to Peninsular Malaysia; S. annamiticus is resurrected for the circum-continental populations ranging through southeastern Thailand, southern Cambodia, and southern Vietnam; a new species—S. preylangensis sp. nov.—is described from an isolated mountain, Phnom Chi, from the Prey Lang Wildlife Sanctuary in central Cambodia; and the taxonomy of S. praesignis remains unchanged. The description of S. preylangensis sp. nov. underscores the necessity to conserve this remnant of lowland evergreen rainforest in the Prey Lang Wildlife Sanctuary. 

scholarly journals A new species of Ituglanis (Siluriformes: Trichomycteridae) from the rio Uruguai basin, southern Brazil

2017 ◽  
Vol 15 (3) ◽  
Author(s):  
Juliano Ferrer ◽  
Laura M. Donin
Keyword(s):  
New Species ◽  
Outer Layer ◽  
Mitochondrial Gene ◽  
Color Pattern ◽  
The Body ◽  
Southern Brazil ◽  
Unique Color ◽  
Pampa Biome ◽  
Genetic Sequences ◽  
A New Species

ABSTRACT A new species of Ituglanis associated to the grasslands of the Pampa biome is described from the rio Uruguai basin, southern Brazil. The new species is distinguished from its congeners by the low number of ribs and by a unique color pattern composed of an outer layer with scattered round black blotches equivalent in size to the eye circumference over a reddish brown background on the lateral surface of the body. We provide the genetic sequences of the mitochondrial gene Cytochrome c Oxydase subunit I (COI) for three of the paratypes and discuss aspects about the recent discovery of the new species.

A new species of Zoniopoda Stål (Orthoptera: Acridoidea: Romaleidae) from Argentina and its phylogenetic position within the genus

Zootaxa ◽  
2011 ◽  
Vol 2913 (1) ◽  
pp. 27 ◽  
Author(s):  
MARTINA E. POCCO ◽  
GONZALO D. RUBIO ◽  
M. MARTA CIGLIANO
Keyword(s):  
New Species ◽  
Cladistic Analysis ◽  
Type Specimen ◽  
Morphological Characters ◽  
Color Pattern ◽  
Species Group ◽  
The Body ◽  
Phylogenetic Position ◽  
Median Carina ◽  
A New Species

A new species of the romaleid grasshopper genus Zoniopoda Stål (Romaleidae: Romaleini) is described and illustrated from the Sierras Chicas of Córdoba Province, central Argentina. A cladistic analysis based on morphological characters indicates that the genus Zoniopoda constitutes a monophyletic group and that Zoniopoda serrana n. sp. must be assigned to Iheringi species group based on synapomorphies of the pronotum and body color. The new species is similar to Z. similis Bruner from Paraguay, Bolivia and Brazil, from which it can be distinguished by the color pattern of the body, shape of the pronotal dorso-median carina and characters of the male terminalia and epiphallus. This paper has been formatted with embedded links to images of the type specimen, maps based on georeferenced specimen data for the genus and an updated key to the species of Zoniopoda available on the Orthoptera Species File (OSF) online (http://orthoptera.speciesfile.org).

scholarly journals A new tiny toad species of Amazophrynella (Anura: Bufonidae) from east of the Guiana Shield in Amazonia, Brazil

PeerJ ◽  
2020 ◽  
Vol 8 ◽  
pp. e9887
Author(s):  
Sarah Mângia ◽  
Ricardo Koroiva ◽  
Diego José Santana
Keyword(s):  
New Species ◽  
Mitochondrial Gene ◽  
Molecular Data ◽  
Guiana Shield ◽  
Additional Species ◽  
Neotropical Species ◽  
Palmar Surface ◽  
Species Complexes ◽  
Sister Clade ◽  
A New Species

The combination of different approaches has successfully delimited new species within many Neotropical species complexes traditionally classified as a single nominal organism. Recent studies have shown that the Amazonian endemic genus Amazophrynella, currently composed of 12 small-sized species, could harbor several additional species. Based on morphology and molecular data, we describe a new species of Amazophrynella from east of the Guiana Shield, in Pará state, Brazil. The new species is characterized by having one of the biggest size of the genus (SVL of males 16.0–17.8 mm and females 22.9–24.4 mm), presence of a large palmar tubercle (occupying 2/4 of the palmar surface), 5.6–8.1% uncorrected p-distance from its sister clade (including A. teko, A. sp.1, and A. manaos) for the 16S mitochondrial gene, and 8.8% for the COI. The new species described here represents a newly discovered lineage. Of the 12 Amazophrynella species currently recognized, two were describe in the last century (A. bokermanni and A. minuta) and the remaining species were recently discovered and described (in the last six years), which underscores the degree to which species richness of Amazophrynella is underestimated.

New cave-dwelling Plakina (Plakinidae, Homoscleromorpha, Porifera) from Martinique Island (French Antilles)

Zootaxa ◽  
2020 ◽  
Vol 4729 (1) ◽  
pp. 92-104 ◽  
Author(s):  
MARIE GRENIER ◽  
CESAR RUIZ ◽  
ANAIRA LAGE ◽  
THIERRY PEREZ
Keyword(s):  
New Species ◽  
Mitochondrial Gene ◽  
Molecular Data ◽  
Integrative Taxonomy ◽  
Submarine Cave ◽  
Unique Composition ◽  
A New Species ◽  
Submarine Caves ◽  
Cox 1

Knowledge of homoscleromorph sponge biodiversity has greatly improved during the last decade thanks to the increasing use of integrative taxonomy and extensive exploration of remote ecosystems. Indeed, recently described species have mostly been small sponges living in dark and near-impenetrable habitats. This work integrates morphological, cytological, ecological and molecular data to describe a new species belonging to the Plakina genus. Plakina doudou sp. nov. was found first during close inspection of photographs taken previously in a submarine cave on Martinique Island, where several new species had already been revealed. The new species lives in syntopy with P. arletensis. It is thinly encrusting, whitish in vivo, and its skeleton harbors a unique composition of diods, triods, monolophose triods and monolophose, dilophose and trilophose calthrops. Sequencing of a portion of the mitochondrial gene cox-1 indicates that the new species belongs to a well-supported clade containing the Mediterranean P. crypta and P. trilopha. However, at the time of publication of this work, we have not yet managed to identify synapomorphies that would support the different clades of Plakina. This genus includes a total of 39 species to date, of which 10 have been recorded in the Western Tropical Atlantic, and 4 in Caribbean submarine caves. 

Devibursaphelenchus kheirii sp. n. (Nematoda: Ektaphelenchinae) from Iran with remarks on Devibursaphelenchus Kakuliya, 1967

Nematology ◽  
2014 ◽  
Vol 16 (9) ◽  
pp. 1069-1078 ◽  
Author(s):  
Farzad Aliramaji ◽  
Ebrahim Pourjam ◽  
Mohammad Reza Atighi ◽  
Akbar Karegar ◽  
Majid Pedram
Keyword(s):  
New Species ◽  
Bayesian Inference ◽  
Maximum Likelihood ◽  
Body Length ◽  
Excretory Pore ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
The Body ◽  
Lateral Field ◽  
Molecular Phylogenetic

Devibursaphelenchus kheirii sp. n. is described and illustrated based on morphological, morphometric and molecular data. The new species is characterised by females with 370-472 μm body length, lip region separated from the body by a shallow constriction, three lines in lateral field, stylet short, 13.5-15.0 μm long, lacking basal knobs or swellings, excretory pore posterior to metacorpus, vulval flap absent, post-uterine sac short, without sperm, rectum and anus obscure, posterior end of the body elongate-conoid with finely rounded terminus. Males of the new species are characterised by their tail ventrally curved after fixation, having two pairs of caudal papillae, spicules 9-11 μm long with an elongated condylus, with rounded tip, pointed rostrum, lacking cucullus and having small conical terminal bursa. The new species comes close to D. hunanensis, D. lini and D. wangi. Beside morphological comparisons, the molecular phylogenetic analyses based on 778 bp of partial sequences of 28S rDNA D2-D3 were performed using two Bayesian inference (BI) and maximum likelihood (ML) methods and revealed that D. kheirii sp. n. formed a clade with the remaining species of the genus and one species of Ektaphelenchoides. This is the first report on occurrence of the genus Devibursaphelenchus in Iran. Devibursaphelenchus eproctatus syn. n. is proposed as a junior synonym of D. hunanensis.

Glossing over cryptic species: Descriptions of four new species of Glossodoris and three new species of Doriprismatica (Nudibranchia: Chromodorididae)

Zootaxa ◽  
2018 ◽  
Vol 4444 (5) ◽  
pp. 501 ◽  
Author(s):  
SHAYLE B. MATSUDA ◽  
TERRENCE M. GOSLINER
Keyword(s):  
New Species ◽  
Morphological Characters ◽  
Color Pattern ◽  
System Support ◽  
Species Complexes ◽  
Molecular Phylogenetic ◽  
Geographic Differences ◽  
Three New Species ◽  
Species Descriptions ◽  
Pseudocryptic Species

Advances in molecular systematics have led to a rapid increase in the identification of cryptic and pseudocryptic species in organisms exhibiting diverse and complex coloration with complicated taxonomic histories. A recent molecular phylogenetic analysis of nudibranchs in the genus Glossodoris (Mollusca: Gastropoda: Heterobranchia: Chromodorididae) and related genera identifies multiple cryptic and pseudocryptic species complexes, one within Glossodoris pallida and three within Glossodoris cincta, and support for three new species of Doriprismatica. Morphological analyses of color pattern, radular structure, buccal mass, and reproductive system support these identifications. Descriptions for Glossodoris buko sp. nov., Glossodoris bonwanga sp. nov., Glossodoris andersonae sp. nov., Glossodoris acosti sp. nov., and what will retain the name Glossodoris sp. cf. cincta are provided here, in addition to descriptions for new species Doriprismatica balut sp. nov., Doriprismatica rossi sp. nov., and Doriprismatica marinae sp. nov.. Glossodoris pallida and G. buko exhibit extreme differences in radular structure in addition to a clear biogeographic split in range. Glossodoris bonwanga, G. andersonae, G. acosti and G. sp. cf. cincta, share morphological and geographic differences but these are not as pronounced as in G. pallida and G. buko. More detailed study of the G. cincta complex is necessary to resolve some remaining systematic challenges. Doriprismatica balut is clearly distinct from all other congeners based on molecular and morphological characters. In contrast, D. rossi and D. marinae are not strongly divergent genetically, but have major morphological divergences that clearly distinguish them.  

scholarly journals Description of three new species of Geometridae (Lepidoptera) using species delimitation in an integrative taxonomy approach for a cryptic species complex

PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e11304
Author(s):  
Simeão S. Moraes ◽  
Ygor Montebello ◽  
Mariana A. Stanton ◽  
Lydia Fumiko Yamaguchi ◽  
Massuo J. Kato ◽  
...  
Keyword(s):  
New Species ◽  
Cryptic Species ◽  
Species Delimitation ◽  
Integrative Taxonomy ◽  
Valid Species ◽  
Undescribed Species ◽  
Species Complexes ◽  
Cryptic Species Complex ◽  
Three New Species ◽  
Host Plant Use

The genus Eois Hübner (Geometridae: Larentiinae) comprises 254 valid species, 217 of which were described from the Neotropics and 31 of those having their type locality in Brazil. Since this species rich genus has never been revised, and may potentially include many cryptic undescribed species, Eois embodies a problematic taxonomic scenario. The actual diversity of Eois is greatly underestimated and the Brazilian fauna is poorly known, both because of inadequate sampling and because of the potential existence of cryptic species "hidden" within some nominal taxa. In this study we investigated the diversity within a cryptic species complexes associated to the E. pallidicosta and E. odatis clades. We describe three new species Eois oya Moraes & Montebello sp. nov., Eois ewa Moraes & Stanton sp. nov., and Eois oxum Moraes & Freitas sp. nov., in an integrative taxonomy approach, using morphology, host plant use and species delimitation tools.

Geographically structured genetic variation in Ptychozoon  lionotum (Squamata: Gekkonidae) and a new species from an isolated volcano in Myanmar

Zootaxa ◽  
2018 ◽  
Vol 4514 (2) ◽  
pp. 202 ◽  
Author(s):  
L. LEE GRISMER ◽  
PERRY L. JR. WOOD ◽  
MYINT KYAW THURA ◽  
MARTA S. GRISMER ◽  
RAFE M. BROWN ◽  
...  
Keyword(s):  
Genetic Variation ◽  
New Species ◽  
Mitochondrial Gene ◽  
Sequence Divergence ◽  
Color Pattern ◽  
Genetic Lineages ◽  
Molecular Phylogenetic ◽  
Habitat Island ◽  
Northern Portion ◽  
A New Species

A molecular phylogenetic analysis of Parachute Geckos (Genus Ptychozoon Kuhl & van Hasselt, 1822) based on the mitochondrial gene ND2 indicates that a newly discovered population from the Mt. Popa volcano—a habitat island in the northern portion of the Bago Yoma mountains, Myanmar—is a new species, P. popaense sp. nov. This species is part of a clade that contains P. bannanense Wang, Wang, & Liu, 2016 and P. lionotum Annandale, 1905 of Indochina. Ptychozoon popaense sp. nov. is morphologically most similar to its sister species P. lionotum  which manifests considerable geographic substructuring of genetic variation but differs from the nominate taxon by an uncorrected pairwise sequence divergence of 16.0–17.1% and by discrete differences in morphology and color pattern. This discovery highlights the unique, insular nature of the Bago Yoma mountains of the Ayeyarwady Basin, which support other endemic gekkonids. It also underscores the growing diversity in this highly derived clade of cryptic, parachuting, geckos characterized by highly divergent genetic lineages, which may indicate the presence of additional, unrecognized species. 

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