Alignment of protein mass spectrometry data by integrated Markov chain shifting method

Yang Feng; Weiping Ma; Zhanfeng Wang; Yaning Yang; Zhiliang Ying

doi:10.4310/sii.2009.v2.n3.a6

Alignment of protein mass spectrometry data by integrated Markov chain shifting method

Statistics and Its Interface ◽

10.4310/sii.2009.v2.n3.a6 ◽

2009 ◽

Vol 2 (3) ◽

pp. 329-340 ◽

Cited By ~ 1

Author(s):

Yang Feng ◽

Weiping Ma ◽

Zhanfeng Wang ◽

Yaning Yang ◽

Zhiliang Ying

Keyword(s):

Mass Spectrometry ◽

Markov Chain ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry

Computational and Statistical Analysis of Protein Mass Spectrometry Data

PLoS Computational Biology ◽

10.1371/journal.pcbi.1002296 ◽

2012 ◽

Vol 8 (1) ◽

pp. e1002296 ◽

Cited By ~ 42

Author(s):

William Stafford Noble ◽

Michael J. MacCoss

Keyword(s):

Mass Spectrometry ◽

Statistical Analysis ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry

Effect of varying degree of resampling on prediction accuracy for observed peptide count in protein mass spectrometry data

2015 11th International Conference on Natural Computation (ICNC) ◽

10.1109/icnc.2015.7378074 ◽

2015 ◽

Cited By ~ 1

Author(s):

Anoop Kumar Tiwari ◽

Abhigyan Nath ◽

Karthikeyan Subbiah ◽

Kaushal Kumar Shukla

Keyword(s):

Mass Spectrometry ◽

Prediction Accuracy ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry

Parallel Implementation of Logical Analysis of Data (LAD) for Discriminatory Analysis of Protein Mass Spectrometry Data

Parallel Processing and Applied Mathematics - Lecture Notes in Computer Science ◽

10.1007/11752578_135 ◽

2006 ◽

pp. 1114-1121 ◽

Cited By ~ 2

Author(s):

Krzysztof Puszyński

Keyword(s):

Mass Spectrometry ◽

Parallel Implementation ◽

Logical Analysis ◽

Mass Spectrometry Data ◽

Logical Analysis Of Data ◽

Protein Mass ◽

Protein Mass Spectrometry ◽

Discriminatory Analysis

A Wrapper Feature Selection Method Based on Simulated Annealing Algorithm for Prostate Protein Mass Spectrometry Data

2008 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology ◽

10.1109/cibcb.2008.4675778 ◽

2008 ◽

Author(s):

Yifeng Li ◽

Yihui Liu

Keyword(s):

Mass Spectrometry ◽

Feature Selection ◽

Simulated Annealing Algorithm ◽

Feature Selection Method ◽

Selection Method ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry ◽

Annealing Algorithm ◽

Wrapper Feature Selection

A high performance algorithm for clustering of large-scale protein mass spectrometry data using multi-core architectures

Proceedings of the 2013 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining - ASONAM '13 ◽

10.1145/2492517.2500245 ◽

2013 ◽

Cited By ~ 2

Author(s):

Fahad Saeed ◽

Jason D. Hoffert ◽

Mark A. Knepper

Keyword(s):

Mass Spectrometry ◽

High Performance ◽

Large Scale ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry

Sparse representation based feature extraction of protein mass spectrometry data for cancer classification

2010 2nd International Conference on Future Computer and Communication ◽

10.1109/icfcc.2010.5497372 ◽

2010 ◽

Author(s):

Yongying Jiang ◽

Lei Zhu ◽

Bin Han ◽

Yaojia Wang ◽

Ying Xu

Keyword(s):

Mass Spectrometry ◽

Feature Extraction ◽

Sparse Representation ◽

Cancer Classification ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry

Dimensionality Reduction of Protein Mass Spectrometry Data Using Random Projection

Neural Information Processing - Lecture Notes in Computer Science ◽

10.1007/11893257_86 ◽

2006 ◽

pp. 776-785

Author(s):

Chen Change Loy ◽

Weng Kin Lai ◽

Chee Peng Lim

Keyword(s):

Mass Spectrometry ◽

Dimensionality Reduction ◽

Random Projection ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry

Sparse Recovery for Protein Mass Spectrometry Data

Practical Applications of Sparse Modeling ◽

10.7551/mitpress/9333.003.0006 ◽

2014 ◽

Cited By ~ 1

Keyword(s):

Mass Spectrometry ◽

Sparse Recovery ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry

A parallel feature selection based on rough set theory for protein mass spectrometry data

International Conference on Automatic Control and Artificial Intelligence (ACAI 2012) ◽

10.1049/cp.2012.0965 ◽

2012 ◽

Cited By ~ 1

Author(s):

Binjie Zhang ◽

Cong Li ◽

Zhenzhou Ji

Keyword(s):

Mass Spectrometry ◽

Feature Selection ◽

Set Theory ◽

Rough Set ◽

Rough Set Theory ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry ◽

Parallel Feature

MassNet: a functional annotation service for protein mass spectrometry data

Nucleic Acids Research ◽

10.1093/nar/gkn241 ◽

2008 ◽

Vol 36 (Web Server) ◽

pp. W491-W495 ◽

Cited By ~ 6

Author(s):

D. Park ◽

B.-C. Kim ◽

S.-W. Cho ◽

S.-J. Park ◽

J.-S. Choi ◽

...

Keyword(s):

Mass Spectrometry ◽

Functional Annotation ◽

Mass Spectrometry Data ◽

Protein Mass ◽

Protein Mass Spectrometry