scholarly journals Protein Crystallography and Structural Biology. Recent Progress of Methodology in Protein Crystallography. Crystal Structure Analysis using a Selenomethionyl Protein.

1996 ◽  
Vol 38 (1) ◽  
pp. 14-19
Author(s):  
Toshiya SENDA
2014 ◽  
Vol 70 (a1) ◽  
pp. C1684-C1684
Author(s):  
Eiki Yamashita ◽  
Akifumi Higashiura ◽  
Masato Yoshimura ◽  
Kazuya Hasegawa ◽  
Yukito Furukawa ◽  
...  

Biological macromolecular assemblies play significant roles in many biological reaction systems, including energy transfer, protein synthesis, protein degradation and signal transduction. A detailed understanding of the functions of the macromolecular assemblies requires information derived from three-dimensional atomic structures. X-ray crystal structure analysis is one of the most powerful methods to determine the three-dimensional structures of macromolecular assemblies at atomic level. Since features of crystals of biological macromolecular assemblies are extremely weak diffraction power and narrow space between the diffraction spots, it is essential to use high brilliance and high paralleled synchrotron radiation for diffraction data collection from crystals of biological macromolecular assemblies. The Institute for Protein Research (IPR) of Osaka University is operating a beamline for crystal structure analysis of biological macromolecular assemblies at SPring-8 (BL44XU). This beamline is designed to collect high quality diffraction data from biological macromolecular assembly crystals with large unit cells. The light source of this beamline is a SPring-8 standard type in-vacuum undulator. Liquid nitrogen cooled double crystal monochromator and horizontal focusing mirror are used as the optical components. BSS (Beamline Scheduling Software), which is SPring-8 protein crystallography beamline standard GUI, is installed to unify user operation throughout protein crystallography beamlines in the SPring-8. We have recently upgraded to a high speed air-bearing goniostat and installed a high performance CCD detector, MX-300HE. Present status and future plan of the beamline will be presented.


2010 ◽  
Vol 52 (1) ◽  
pp. 8-13 ◽  
Author(s):  
Masaru TANOKURA ◽  
Koji NAGATA ◽  
Ken-ichi MIYAZONO ◽  
Takuya MIYAKAWA ◽  
Masahiko OKAI

Author(s):  
M. Bidya Sagar ◽  
K. Ravikumar ◽  
Y. S. Sadanandam

AbstractThe crystallographic characterization of the following three calcium channel antagonists is reported here: 2,6-dimethyl-3,5-dicarbamoyl-4-[2-nitro]-1,4-dihydropyridine (


Pharmaceutics ◽  
2021 ◽  
Vol 13 (5) ◽  
pp. 734
Author(s):  
Aija Trimdale ◽  
Anatoly Mishnev ◽  
Agris Bērziņš

The arrangement of hydroxyl groups in the benzene ring has a significant effect on the propensity of dihydroxybenzoic acids (diOHBAs) to form different solid phases when crystallized from solution. All six diOHBAs were categorized into distinctive groups according to the solid phases obtained when crystallized from selected solvents. A combined study using crystal structure and molecule electrostatic potential surface analysis, as well as an exploration of molecular association in solution using spectroscopic methods and molecular dynamics simulations were used to determine the possible mechanism of how the location of the phenolic hydroxyl groups affect the diversity of solid phases formed by the diOHBAs. The crystal structure analysis showed that classical carboxylic acid homodimers and ring-like hydrogen bond motifs consisting of six diOHBA molecules are prominently present in almost all analyzed crystal structures. Both experimental spectroscopic investigations and molecular dynamics simulations indicated that the extent of intramolecular bonding between carboxyl and hydroxyl groups in solution has the most significant impact on the solid phases formed by the diOHBAs. Additionally, the extent of hydrogen bonding with solvent molecules and the mean lifetime of solute–solvent associates formed by diOHBAs and 2-propanol were also investigated.


1999 ◽  
Vol 23 (9) ◽  
pp. 578-579
Author(s):  
Rainer Schobert ◽  
Hermann Pfab ◽  
Jutta Böhmer ◽  
Frank Hampel ◽  
Andreas Werner

Racemates of (η3-allyl)tricarbonyliron lactone complex Fe(CO)3{η1:η3-C(O)XCH2CHCMeCH2} 1a (X = O) and (η3-allyl)tricarbonyliron lactam complex 2a (X = NMe) are resolved on a preparative scale by HPLC on cellulose tris(3,5-dimethylphenyl)carbamate/silica gel RP-8 and the absolute configuration of (-)-2a is determined by X-ray crystal structure analysis.


2005 ◽  
Vol 88 (4) ◽  
pp. 731-750 ◽  
Author(s):  
Stefan Sahli ◽  
Brian Frank ◽  
W. Bernd Schweizer ◽  
François Diederich ◽  
Denise Blum-Kaelin ◽  
...  

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