scholarly journals Growth-promoting characteristics of potential nitrogen-fixing bacteria in the root of an invasive plant Ageratina adenophora

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e7099 ◽  
Author(s):  
Kai Fang ◽  
Zhu-Shou-Neng Bao ◽  
Lin Chen ◽  
Jie Zhou ◽  
Zhi-Ping Yang ◽  
...  

Root endophytic nitrogen-fixing bacteria (reNFB) have been proposed as important contributors to the invasiveness of exotic legumes; however, the reNFB of invasive nonlegumes has received less attention. In particular, the growth-promoting effect of reNFB on invasive plants remains unknown. In this study, 131 strains of potential nitrogen-fixing bacteria were isolated and purified from the roots of the invasive plant, Ageratina adenophora, in Southwest China. Phylogenetically, these reNFB were categorized into three phyla at 97% sequence identity that included Proteobacteria (92.4%), Actinobacteria (4.6%), and Firmicutes (3.1%). The dominant isolates ranked by number were Pseudomonas (80 isolates, 61.1%), Rhizobium (12 isolates, 9.2%), and Duganella (11 isolates, 8.4%). The community composition and diversity of A. adenophora reNFB were markedly different across study regions. The capacity of these reNFB to accumulate indolyl-3-acetic acid (IAA), solubilize phosphate, and produce siderophores was determined. All 131 isolates of reNFB accumulated IAA, 67 isolates solubilized phosphate, and 108 isolates produced siderophores. Among the three dominant genera of reNFB, Pseudomonas had the highest phosphorus solubilization and siderophore production, while the accumulation of IAA in the genus Duganella was the lowest. Interestingly, the calculated reNFB Shannon diversity index of each A. adenophora individual was negatively correlated with the capacity of reNFB to produce growth-promoting products. Six randomly selected isolates from three dominant genera were further used to conduct inoculation experiments, and all isolates showed significant positive growth-promoting effects on A. adenophora seedlings. The contribution of reNFB to the root biomass was higher than that to the shoot biomass. Our results suggest that reNFB, similar to soil or nodular nitrogen-fixing bacteria, can potentially promote plant growth and may play an important role in the invasion of nonleguminous plants. More detailed studies on the correlation between reNFB and invasive plants are necessary.

2012 ◽  
Vol 54 ◽  
pp. 32-38 ◽  
Author(s):  
Chan-Wen Xu ◽  
Ming-Zhi Yang ◽  
Yun-Jiao Chen ◽  
Li-Min Chen ◽  
De-Zhu Zhang ◽  
...  

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Luz K. Medina-Cordoba ◽  
Aroon T. Chande ◽  
Lavanya Rishishwar ◽  
Leonard W. Mayer ◽  
Lina C. Valderrama-Aguirre ◽  
...  

AbstractPrevious studies have shown the sugarcane microbiome harbors diverse plant growth promoting microorganisms, including nitrogen-fixing bacteria (diazotrophs), which can serve as biofertilizers. The genomes of 22 diazotrophs from Colombian sugarcane fields were sequenced to investigate potential biofertilizers. A genome-enabled computational phenotyping approach was developed to prioritize sugarcane associated diazotrophs according to their potential as biofertilizers. This method selects isolates that have potential for nitrogen fixation and other plant growth promoting (PGP) phenotypes while showing low risk for virulence and antibiotic resistance. Intact nitrogenase (nif) genes and operons were found in 18 of the isolates. Isolates also encode phosphate solubilization and siderophore production operons, and other PGP genes. The majority of sugarcane isolates showed uniformly low predicted virulence and antibiotic resistance compared to clinical isolates. Six strains with the highest overall genotype scores were experimentally evaluated for nitrogen fixation, phosphate solubilization, and the production of siderophores, gibberellic acid, and indole acetic acid. Results from the biochemical assays were consistent and validated computational phenotype predictions. A genotypic and phenotypic threshold was observed that separated strains by their potential for PGP versus predicted pathogenicity. Our results indicate that computational phenotyping is a promising tool for the assessment of bacteria detected in agricultural ecosystems.


2020 ◽  
Vol 6 (1) ◽  
pp. 46-53
Author(s):  
Miftahul Mukarromah ◽  
Ari Hayati ◽  
Hasan Zayadi

Balekambang Beach is the most visited beach destination in Malang Regency until the end of 2015. One of the invasive pathways of invasive plants is Tourism. The purpose of this study was to identify invasive plant species, diversity and compare the value of the diversity index with abiotic factors.This research method is descriptive with systematic sampling techniques using Belt Transect, and measurements of abiotic factors include edafic factors and climatic micro factors. Invasive alien plant species found in the Balekambang coastal forest are identified as seventeen species namely (Hemighraphis glaucescens), (Oplismenus sp), (Amomum coccineum), (Arenga obtusifolia), (Leucaena leucochephana), (Mimosa sp), (Cassia siamea), (Eupatorium odoratum), (Hyptis capitata), (Cynodon dactylon), (Sida rhombifolia), (Synedrella nudiflora), (Chromolaena odorata),  (Leucaena leucochepala), (Mimosa pudica), and (Ruellia tuberosa) with the index value of invasive plant diversity in protected forests and production classified as high compared to mangroves. The results of the diversity index value with abiotic factors showed a positive (+) direction on soil sailinity where the R2 value was 0.5606 or 50%, which means it showed a relationship between soil salinity and an abundance of invasive plants in Balekambang coastal forest area of 50%.  Keywords:invasive plants, Balekambang beach, belt transect, diversity ABSTRAK Pantai Balekambang adalah destinasi wisata alam pantai di Kabupaten Malang yang paling banyak dikunjungi hingga akhir tahun 2015.Salah satu jalur invasi dari tumbuhan invasif adalah Tourism (Wisata). Tujuan dari penelitian ini adalah mengidentifikasi jenis tumbuhan invasif, keanekaragaman dan membandingkan nilai indeks keanekaragaman dengan faktor abiotik. Metode penelitian ini deskriptif dengan tehnik pengambilan sampling secara sistematis menggunakan Belt Transect, dan pengukuran faktor abiotik meliputi faktor edafik dan faktor mikro klimatik. Jenis spesies tumbuhan asing invasif yang terdapat di hutan pantai Balekambang diidentifikasi sebanyak tujuh belas spesies yaitu Hemighraphis glaucescens, Oplismenus sp, Amomum coccineum, Arenga obtusifolia, Leucaena leucochephana, Mimosa sp, Cassia siamea, Eupatorium odoratum, Hyptis capitata, Cynodon dactylon, Sida rhombifolia, Synedrella nudiflora.Chromolaena odorata, Leucaena leucochepala, Mimosa pudica, dan Ruellia tuberose dengan nilai indeks keanekaragaman tumbuhan invasif pada hutan lindung dan produksi tergolong tinggi dibanding mangrove. Hasil analisis uji korelasi nilai indeks keanekaragaman dengan faktor abiotik menunjukkan arah positif (+) pada salinitas tanah dimana nilai R2 sebesar 0.5606 atau 50%, yang artinya menunjukkan hubungan antara salinitas tanah dengan kelimpahan tumbuhan invasif di kawasan hutan pantai Balekambang sebesar 50%. Kata kunci: tumbuhan invasif, pantai Balekambang, belt transect, keanekaragaman


2017 ◽  
Vol 199 (3) ◽  
pp. 513-517 ◽  
Author(s):  
Van T. K. Pham ◽  
Hans Rediers ◽  
Maarten G. K. Ghequire ◽  
Hiep H. Nguyen ◽  
René De Mot ◽  
...  

2013 ◽  
Vol 53 (12) ◽  
pp. 1004-1015 ◽  
Author(s):  
Md. Rashedul Islam ◽  
Tahera Sultana ◽  
M. Melvin Joe ◽  
Woojong Yim ◽  
Jang-Cheon Cho ◽  
...  

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