in vivo binding
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2021 ◽  
Author(s):  
Patricia Hernández‐Martínez ◽  
Eric C. Bretsnyder ◽  
James A. Baum ◽  
Jeff A. Haas ◽  
Graham P. Head ◽  
...  

2021 ◽  
Author(s):  
Yanping Zhu ◽  
Jiao Wang ◽  
Wenya Su ◽  
Ting Lu ◽  
Aiying Li ◽  
...  

GlnR activates nitrogen metabolism genes under nitrogen-limited conditions whereas MtrA represses these genes under nutrient-rich conditions in Streptomyces. In this study, we compared the transcription patterns of nitrogen metabolism genes in a double deletion mutant (ΔmtrA-glnR) lacking both mtrA and glnR and in mutants lacking either mtrA (ΔmtrA) or glnR (ΔglnR). The nitrogen metabolism genes were expressed similarly in ΔmtrA-glnR and ΔglnR under both nitrogen-limited and nutrient-rich conditions, with patterns distinctly different from that of ΔmtrA, suggesting a decisive role for GlnR in the control of nitrogen metabolism genes and further suggesting that regulation of these genes by MtrA is GlnR-dependent. MtrA and GlnR utilize the same binding sites upstream of nitrogen metabolism genes, and we showed stronger in vivo binding of MtrA to these sites under nutrient-rich conditions and of GlnR under nitrogen-limited conditions, consistent with the higher levels of MtrA or GlnR under those respective conditions. In addition, we showed that both mtrA and glnR are auto-regulatory. Our study provides new insights into the regulation of nitrogen metabolism genes in Streptomyces.


2020 ◽  
Vol 79 (3) ◽  
pp. 459-471.e4 ◽  
Author(s):  
Sagie Brodsky ◽  
Tamar Jana ◽  
Karin Mittelman ◽  
Michal Chapal ◽  
Divya Krishna Kumar ◽  
...  

2020 ◽  
Vol 87 (6) ◽  
pp. 570-576 ◽  
Author(s):  
Margaret Flanigan ◽  
Savannah Tollefson ◽  
Michael L. Himes ◽  
Rehima Jordan ◽  
Katherine Roach ◽  
...  

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