Cache-efficient sweeping-based interval joins for extended Allen relation predicates

We develop a family of efficient plane-sweeping interval join algorithms for evaluating a wide range of interval predicates such as Allen’s relationships and parameterized relationships. Our technique is based on a framework, components of which can be flexibly combined in different manners to support the required interval relation. In temporal databases, our algorithms can exploit a well-known and flexible access method, the Timeline Index, thus expanding the set of operations it supports even further. Additionally, employing a compact data structure, the gapless hash map, we utilize the CPU cache efficiently. In an experimental evaluation, we show that our approach is several times faster and scales better than state-of-the-art techniques, while being much better suited for real-time event processing.

Linear space string correction algorithm using the Damerau-Levenshtein distance

Background The Damerau-Levenshtein (DL) distance metric has been widely used in the biological science. It tries to identify the similar region of DNA,RNA and protein sequences by transforming one sequence to the another using the substitution, insertion, deletion and transposition operations. Lowrance and Wagner have developed an O(mn) time O(mn) space algorithm to find the minimum cost edit sequence between strings of length m and n, respectively. In our previous research, we have developed algorithms that run in O(mn) time using only O(s∗min{m,n}+m+n) space, where s is the size of the alphabet comprising the strings, to compute the DL distance as well as the corresponding edit sequence. These are so far the fastest and most space efficient algorithms. In this paper, we focus on the development of algorithms whose asymptotic space complexity is linear. Results We develop linear space algorithms to compute the Damerau-Levenshtein (DL) distance between two strings and determine the optimal trace (corresponding edit operations.)Extensive experiments conducted on three computational platforms–Xeon E5 2603, I7-x980 and Xeon E5 2695–show that, our algorithms, in addition to using less space, are much faster than earlier algorithms. Conclusion Besides using less space than the previously known algorithms,significant run-time improvement was seen for our new algorithms on all three of our experimental platforms. On all platforms, our linear-space cache-efficient algorithms reduced run time by as much as 56.4% and 57.4% in respect to compute the DL distance and an optimal edit sequences compared to previous algorithms. Our multi-core algorithms reduced the run time by up to 59.3% compared to the best previously known multi-core algorithms.

A flexible high-performance simulator for verifying and benchmarking quantum circuits implemented on real hardware

Here we present qFlex, a flexible tensor network-based quantum circuit simulator. qFlex can compute both the exact amplitudes, essential for the verification of the quantum hardware, as well as low-fidelity amplitudes, to mimic sampling from Noisy Intermediate-Scale Quantum (NISQ) devices. In this work, we focus on random quantum circuits (RQCs) in the range of sizes expected for supremacy experiments. Fidelity f simulations are performed at a cost that is 1/f lower than perfect fidelity ones. We also present a technique to eliminate the overhead introduced by rejection sampling in most tensor network approaches. We benchmark the simulation of square lattices and Google’s Bristlecone QPU. Our analysis is supported by extensive simulations on NASA HPC clusters Pleiades and Electra. For our most computationally demanding simulation, the two clusters combined reached a peak of 20 Peta Floating Point Operations per Second (PFLOPS) (single precision), i.e., 64% of their maximum achievable performance, which represents the largest numerical computation in terms of sustained FLOPs and the number of nodes utilized ever run on NASA HPC clusters. Finally, we introduce a novel multithreaded, cache-efficient tensor index permutation algorithm of general application.