RNA and the Goldilocks Zone: Where Mg2+ concentration is just right

Mg2+, the most abundant divalent cation in cells, catalyzes RNA cleavage but can also promote RNA folding. Because folding can protect RNA from cleavage, we predicted a "Goldilocks zone", which is a local maximum in RNA lifetime at the minimum Mg2+ concentration required for folding. By simulation and experiment, we characterized the RNA Goldilocks zone and its dependence on cleavage parameters and extent of folding. We show experimentally that yeast tRNAPhe can inhabit a Goldilocks zone. The Goldilocks phenomena appears to be robust and is tunable by changes in magnesium affinity, and a variety of other factors. Goldilocks behavior can be more pronounced for RNAs with intermediate folding states. Goldilocks behavior allows ultrafine control of RNA chemical lifetime. A subset of RNAs in vivo are expected to occupy the Goldilocks zone. In evolutionary context, Goldilocks behavior may have shaped RNA in an early Earth environment containing Mg2+ and other metals. RNAs that do not fold cannot access a Goldilocks zone.

A postulate to assess ‘habitability’

One principal challenge in biology is defining a postulate by which the habitability of other planets can be assessed. Current assessments suffer from two potential weaknesses. With respect to other planets, either assumptions are made about the physical and chemical conditions of environments that err on the side of biological optimism without empirical constraint by spacecraft observations or novel physiologies of microorganisms are invented to fit extraterrestrial environmental conditions with no demonstrated microbiological counterparts on Earth. Attempts to assess the habitability of the early Earth suffer from similar problems. We discuss the following postulate: ‘the proposition that a planet is or was habitable requires that the physiological requirements of microorganisms on Earth known at the time of assessment match the empirically determined combined physical and chemical conditions in the extraterrestrial or early Earth environment being assessed’ as a means of evaluating ‘habitability’. We use as tests for our postulate the early Earth and the cloud deck of Venus (a habitat that has been a source of optimistic debate for forty years). We conclude that, although the early Earth was habitable, Venus is a dead world.