Lecture Notes in Computer Science - Transactions on Computational Systems Biology VII
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Published By Springer Berlin Heidelberg

9783540488378, 9783540488392
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From Logical Regulatory Graphs to Standard Petri Nets: Dynamical Roles and Functionality of Feedback Circuits

2006 ◽  
pp. 56-72 ◽  
Author(s):  
Elisabeth Remy ◽  
Paul Ruet ◽  
Luis Mendoza ◽  
Denis Thieffry ◽  
Claudine Chaouiya
Keyword(s):  
Petri Nets ◽  
Feedback Circuits

Graph Theory for Rule-Based Modeling of Biochemical Networks

2006 ◽  
pp. 89-106 ◽  
Author(s):  
Michael L. Blinov ◽  
Jin Yang ◽  
James R. Faeder ◽  
William S. Hlavacek
Keyword(s):  
Graph Theory ◽  
Biochemical Networks ◽  
Rule Based

A Specification Language and a Framework for the Execution of Composite Models in Systems Biology

2006 ◽  
pp. E1-E1 ◽  
Author(s):  
Ofer Margoninski ◽  
Peter Saffrey ◽  
James Hetherington ◽  
Linzhong Li ◽  
Anthony Finkelstein ◽  
...  
Keyword(s):  
Systems Biology ◽  
Specification Language ◽  
Composite Models

A Specification Language and a Framework for the Execution of Composite Models in Systems Biology

2006 ◽  
pp. 163-184 ◽  
Author(s):  
Ofer Margoninski ◽  
Peter Saffrey ◽  
James Hetherington ◽  
Anthony Finkelstein ◽  
Anne Warner
Keyword(s):  
Systems Biology ◽  
Specification Language ◽  
Composite Models
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