Methods in Molecular Biology - Systems Biology
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Published By Humana Press

9781934115640, 9781597455251
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A Cell Architecture Modeling System Based on Quantitative Ultrastructural Characteristics

2009 ◽  
pp. 289-312 ◽  
Author(s):  
Július Parulek ◽  
Miloš Šrámek ◽  
Michal Červęanský ◽  
Marta Novotová ◽  
Ivan Zahradník*
Keyword(s):  
Cell Architecture ◽  
A Cell ◽  
Ultrastructural Characteristics ◽  
Architecture Modeling

scholarly journals Rule-Based Modeling of Biochemical Systems with BioNetGen

2009 ◽  
pp. 113-167 ◽  
Author(s):  
James R. Faeder ◽  
Michael L. Blinov ◽  
William S. Hlavacek
Keyword(s):  
Rule Based ◽  
Biochemical Systems

scholarly journals Modeling Molecular Regulatory Networks with JigCell and PET

2009 ◽  
pp. 81-111 ◽  
Author(s):  
Clifford A. Shaffer ◽  
Jason W. Zwolak ◽  
Ranjit Randhawa ◽  
John J. Tyson
Keyword(s):  
Regulatory Networks

Computational Modeling of Biochemical Networks Using COPASI

2009 ◽  
pp. 17-59 ◽  
Author(s):  
Pedro Mendes ◽  
Stefan Hoops ◽  
Sven Sahle ◽  
Ralph Gauges ◽  
Joseph Dada ◽  
...  
Keyword(s):  
Computational Modeling ◽  
Biochemical Networks

Systems Approach to Therapeutics Design

2009 ◽  
pp. 221-236 ◽  
Author(s):  
Bert J. Lao ◽  
Daniel T. Kamei
Keyword(s):  
Systems Approach

scholarly journals Multicell Simulations of Development and Disease Using the CompuCell3D Simulation Environment

2009 ◽  
pp. 361-428 ◽  
Author(s):  
Maciej H. Swat ◽  
Susan D. Hester ◽  
Ariel I. Balter ◽  
Randy W. Heiland ◽  
Benjamin L. Zaitlen ◽  
...  
Keyword(s):  
Simulation Environment
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