Modeling Mutations in Proteins Using Medusa and Discrete Molecule Dynamics

2010 ◽  
pp. 453-476
Author(s):  
Shuangye Yin ◽  
Feng Ding ◽  
Nikolay V. Dokholyan
Keyword(s):  
Molecule Dynamics

Multidimensional Characterization of Single‐Molecule Dynamics in a Plasmonic Nanocavity

2021 ◽  
Author(s):  
Lucas Domulevicz ◽  
Hyunhak Jeong ◽  
Nayan K. Paul ◽  
Juan Sebastian Gomez-Diaz ◽  
Joshua Hihath
Keyword(s):  
Single Molecule ◽  
Single Molecule Dynamics ◽  
Molecule Dynamics

Coupling of Caged Molecule Dynamics to JG β-Relaxation II: Polymers

2015 ◽  
Vol 119 (38) ◽  
pp. 12502-12518 ◽  
Author(s):  
K. L. Ngai ◽  
S. Capaccioli ◽  
D. Prevosto ◽  
Li-Min Wang
Keyword(s):  
Β Relaxation ◽  
Molecule Dynamics

Single-molecule dynamics of site-specific labeled transforming growth factor type II receptors on living cells

2014 ◽  
Vol 50 (94) ◽  
pp. 14724-14727 ◽  
Author(s):  
Ming Cheng ◽  
Wei Zhang ◽  
Jinghe Yuan ◽  
Wangxi Luo ◽  
Nan Li ◽  
...  
Keyword(s):  
Growth Factor ◽  
Single Molecule ◽  
Transforming Growth Factor ◽  
Living Cells ◽  
Unnatural Amino Acid ◽  
Type Ii ◽  
Site Specific ◽  
Single Molecule Dynamics ◽  
Factor Type ◽  
Molecule Dynamics

Single-molecule dynamics of the transforming growth factor type II receptor (TβRII) labeled by an unnatural amino acid.

NMR study of water molecule dynamics in ferroelectric Rochelle salt

1969 ◽  
Vol 28 (9) ◽  
pp. 624-625 ◽  
Author(s):  
R. Blinc ◽  
E.M. Peterson ◽  
D.E. O'Reilly
Keyword(s):  
Water Molecule ◽  
Rochelle Salt ◽  
Nmr Study ◽  
Molecule Dynamics

Theoretical Study of Iron Heterogeneous Growth on the Surface of C60 Molecule

2014 ◽  
Vol 1081 ◽  
pp. 115-118
Author(s):  
Qi Cheng Liu ◽  
Yun Fang Li
Keyword(s):  
Crystallization Process ◽  
Theoretical Study ◽  
Covalent Bond ◽  
Md Simulations ◽  
Nucleation And Growth ◽  
Bond Forming ◽  
Regular Icosahedron ◽  
Molecule Dynamics ◽  
Molecule Surface ◽  
Regular Closed

Direct molecule dynamics (MD) simulations have also been performed to study heterogeneous nucleation and growth of iron on C60 molecule. The grown mechanism of this crystallization process was explored. The results indicate that 92 iron atoms attach to C60 molecule surface can form new covalent bond, forming a closed regular icosahedron. More atoms grow in layer to form bigger regular closed clathrate base on the structure of former one. As increase of atoms number, there will appear some crystal faces.

Fluorescence studies of small molecule dynamics in toluene/polysorbate-20/water microemulsions

2021 ◽  
Author(s):  
Muhammad Redwan Hassan ◽  
Brandon Colon ◽  
James Russell ◽  
Tessa Calhoun
Keyword(s):  
Small Molecule ◽  
Fluorescence Studies ◽  
Polysorbate 20 ◽  
Molecule Dynamics

Nanoconfinement greatly speeds up the nucleation and the annealing in single-DNA collapse

Soft Matter ◽  
2017 ◽  
Vol 13 (37) ◽  
pp. 6363-6371 ◽  
Author(s):  
Liang Dai ◽  
Jeremy J. Jones ◽  
Alexander R. Klotz ◽  
Stephen Levy ◽  
Patrick S. Doyle
Keyword(s):  
Single Molecule ◽  
Single Molecule Dynamics ◽  
New Phenomena ◽  
Molecule Dynamics

Manipulating and measuring single-molecule dynamics and reactions in nanofluidics is a rapidly growing field with broad applications in developing new biotechnologies, understanding nanoconfinement effects in vivo, and exploring new phenomena in confinement.

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