scholarly journals A method for applying lateral surface eddy diffusion in ocean models with a general vertical coordinate

2021 ◽  
Author(s):  
Gustavo M. Marques ◽  
Andrew E. Shao ◽  
Scott D. Bachman ◽  
Gokhan Danabasoglu ◽  
Frank O. Bryan
2017 ◽  
Vol 47 (3) ◽  
pp. 667-687 ◽  
Author(s):  
Sjoerd Groeskamp ◽  
Bernadette M. Sloyan ◽  
Jan D. Zika ◽  
Trevor J. McDougall

AbstractThis study provides observation-based estimates, determined by inverse methods, of horizontal and isopycnal eddy diffusion coefficients KH and KI, respectively, the small-scale mixing coefficient D, and the diathermohaline streamfunction Ψ. The inverse solution of Ψ represents the ocean circulation in Absolute Salinity SA and Conservative Temperature Θ coordinates. The authors suggest that the observation-based estimate of Ψ will be useful for comparison with equivalent diagnostics from numerical climate models. The estimates of KH and KI represent horizontal eddy mixing in the mixed layer and isopycnal eddy mixing in the ocean interior, respectively. This study finds that the solution for D and KH are comparable to existing estimates. The solution for KI is one of the first observation-based global and full-depth constrained estimates of isopycnal mixing and indicates that KI is an order of magnitude smaller than KH. This suggests that there is a large vertical variation in the eddy mixing coefficient, which is generally not included in ocean models. With ocean models being very sensitive to the choice of isopycnal mixing, this result suggests that further investigation of the spatial structure of isopycnal eddy mixing from observations is required.


2013 ◽  
Vol 10 (7) ◽  
pp. 11111-11153
Author(s):  
A. Romanou ◽  
J. Romanski ◽  
W. W. Gregg

Abstract. Sensitivities of the oceanic biological pump within the GISS climate modeling system are explored here. Results are presented from twin control simulations of the air-sea CO2 gas exchange using two different ocean models coupled to the same atmosphere. The two ocean models (Russell ocean model and Hybrid Coordinate Ocean Model, HYCOM) use different vertical coordinate systems, and therefore different representations of column physics. Both variants of the GISS climate model are coupled to the same ocean biogeochemistry module (the NASA Ocean Biogeochemistry Model, NOBM) which computes prognostic distributions for biotic and abiotic fields that influence the air-sea flux of CO2 and the deep ocean carbon transport and storage. In particular, the model differences due to remineralization rate changes are compared to differences attributed to physical processes modeled differently in the two ocean models such as ventilation, mixing, eddy stirring and vertical advection. The Southern Ocean emerges as a key region where the CO2 flux is as sensitive to biological parameterizations as it is to physical parameterizations. Mixing in the Southern Ocean is shown to be a~good indicator of the magnitude of the biological pump efficiency regardless of physical model choice.


2004 ◽  
Vol 14 (03) ◽  
pp. 999-1015 ◽  
Author(s):  
PEDRO G. LIND ◽  
SVEN TITZ ◽  
TILL KUHLBRODT ◽  
JOÃO A. M. CORTE-REAL ◽  
JÜRGEN KURTHS ◽  
...  

We present a study of ocean convection parameterization based on a novel approach which includes both eddy diffusion and advection and consists of a two-dimensional lattice of bistable maps. This approach retains important features of usual grid models and allows to assess the relative roles of diffusion and advection in the spreading of convective cells. For large diffusion our model exhibits a phase transition from convective patterns to a homogeneous state over the entire lattice. In hysteresis experiments we find staircase behavior depending on stability thresholds of local convection patterns. This nonphysical behavior is suspected to induce spurious abrupt changes in the spreading of convection in ocean models. The final steady state of convective cells depends not only on the magnitude of the advective velocity but also on its direction, implying a possible bias in the development of convective patterns. Such bias points to the need for an appropriate choice of grid geometry in ocean modeling.


Author(s):  
J. J. Paulin

Movement in epimastigote and trypomastigote stages of trypanosomes is accomplished by planar sinusoidal beating of the anteriorly directed flagellum and associated undulating membrane. The flagellum emerges from a bottle-shaped depression, the flagellar pocket, opening on the lateral surface of the cell. The limiting cell membrane envelopes not only the body of the trypanosome but is continuous with and insheathes the flagellar axoneme forming the undulating membrane. In some species a paraxial rod parallels the axoneme from its point of emergence at the flagellar pocket and is an integral component of the undulating membrane. A portion of the flagellum may extend beyond the anterior apex of the cell as a free flagellum; the length is variable in different species of trypanosomes.


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