In Vitro Selection of Small RNAs that Bind to Escherichia coli Phenylalanyl-tRNA Synthetase

1994 ◽  
Vol 242 (3) ◽  
pp. 186-192 ◽  
Author(s):  
Ellen Tinkle Peterson ◽  
Tao Pan ◽  
Julia Coleman ◽  
Olke C. Uhlenbeck
Keyword(s):  
Escherichia Coli ◽  
Small Rnas ◽  
In Vitro Selection ◽  
Trna Synthetase ◽  
Selection Of

In vitro selection of RNAs aminoacylated by Escherichia coli leucyl-tRNA synthetase

1998 ◽  
Vol 283 (3) ◽  
pp. 605-618 ◽  
Author(s):  
Haruichi Asahara ◽  
Nobukazu Nameki ◽  
Tsunemi Hasegawa
Keyword(s):  
Escherichia Coli ◽  
In Vitro Selection ◽  
Trna Synthetase ◽  
Selection Of

scholarly journals Convergent In Vivo and In Vitro Selection of Ceftazidime Resistance Mutations at Position 167 of CTX-M-3 β-Lactamase in Hypermutable Escherichia coli Strains

2008 ◽  
Vol 52 (4) ◽  
pp. 1297-1301 ◽  
Author(s):  
Marina N. Stepanova ◽  
Maxim Pimkin ◽  
Anatoly A. Nikulin ◽  
Varvara K. Kozyreva ◽  
Elena D. Agapova ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Molecular Typing ◽  
In Vitro Selection ◽  
Resistance Mutations ◽  
Natural Evolution ◽  
E Coli ◽  
Low Activity ◽  
Selection Of

ABSTRACT We report on a novel CTX-M extended-spectrum β-lactamase (ESBL), designated CTX-M-42, with enhanced activity toward ceftazidime. CTX-M-42 was identified in a hypermutable Escherichia coli nosocomial isolate (isolate Irk2320) and is a Pro167Thr amino acid substitution variant of CTX-M-3. By molecular typing of ESBL-producing E. coli strains previously isolated in the same hospital ward, we were able to identify a putative progenitor (strain Irk1224) of Irk2320, which had a mutator phenotype and harbored the CTX-M-3 β-lactamase. To reproduce the natural evolution of CTX-M-3, we selected for ceftazidime resistance mutations in bla CTX-M-3 gene in vitro both in clinical isolate Irk1224 and in laboratory-derived hypermutable (mutD5) strain GM2995. These experiments yielded CTX-M-3Pro167Ser and CTX-M-3Asn136Lys mutants which conferred higher levels of resistance to ceftazidime than to cefotaxime. CTX-M-3Asn136Lys had a level of low activity toward ampicillin, which may explain its absence from clinical isolates. We conclude that the selection of CTX-M-42 could have occurred in vivo following treatment with ceftazidime and was likely facilitated by the hypermutable background.

In vitro selection of resistance to pradofloxacin and ciprofloxacin in canine uropathogenic Escherichia coli isolates

2014 ◽  
Vol 174 (3-4) ◽  
pp. 514-522 ◽  
Author(s):  
Xiaoqiang Liu ◽  
Caterina Lazzaroni ◽  
Sherine A. Aly ◽  
Kamoltip Thungrat ◽  
Dawn M. Boothe
Keyword(s):  
Escherichia Coli ◽  
In Vitro Selection ◽  
Uropathogenic Escherichia Coli ◽  
Selection Of ◽  
Selection Of Resistance

scholarly journals CTX-M Expression and Selection of Ertapenem Resistance in Klebsiella pneumoniae and Escherichia coli

2008 ◽  
Vol 53 (2) ◽  
pp. 832-834 ◽  
Author(s):  
Delphine Girlich ◽  
Laurent Poirel ◽  
Patrice Nordmann
Keyword(s):  
Escherichia Coli ◽  
Klebsiella Pneumoniae ◽  
In Vitro Selection ◽  
Gene Frequencies ◽  
Clinical Strains ◽  
Selection Of

ABSTRACT In vitro selection of mutants with decreased susceptibility to ertapenem was performed using Escherichia coli and Klebsiella pneumoniae clinical strains producing either the bla CTX-M-2, bla CTX-M-3, bla CTX-M-9, or bla CTX-M-15 gene. Frequencies of mutants with decreased susceptibilities to ertapenem were similar for all β-lactamases expressed.

In vitro selection of Escherichia coli O157:H7-specific RNA aptamer

2012 ◽  
Vol 417 (1) ◽  
pp. 414-420 ◽  
Author(s):  
Young Ju Lee ◽  
Seung Ryul Han ◽  
Jin-Soo Maeng ◽  
Yong-Jin Cho ◽  
Seong-Wook Lee
Keyword(s):  
Escherichia Coli ◽  
In Vitro Selection ◽  
Escherichia Coli O157 ◽  
Rna Aptamer ◽  
Selection Of

In vitro selection of RNA aptamer against Escherichia coli release factor 1

2007 ◽  
Vol 17 (5) ◽  
pp. 1216-1220 ◽  
Author(s):  
Shinsuke Sando ◽  
Atsushi Ogawa ◽  
Teruyuki Nishi ◽  
Masayoshi Hayami ◽  
Yasuhiro Aoyama
Keyword(s):  
Escherichia Coli ◽  
In Vitro Selection ◽  
Rna Aptamer ◽  
Release Factor ◽  
Selection Of

scholarly journals In vitro selection of RNA aptamers for the Escherichia coli release factor 1

2005 ◽  
Vol 49 (1) ◽  
pp. 269-270 ◽  
Author(s):  
Atsushi Ogawa ◽  
Teruyuki Nishi ◽  
Shinsuke Sando ◽  
Yasuhiro Aoyama
Keyword(s):  
Escherichia Coli ◽  
In Vitro Selection ◽  
Rna Aptamers ◽  
Release Factor ◽  
Selection Of
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