Resolution of Natural Microbial Community Dynamics by Community Fingerprinting, Flow Cytometry, and Trend Interpretation Analysis

2010 ◽  
pp. 151-181 ◽  
Author(s):  
Petra Bombach ◽  
Thomas Hübschmann ◽  
Ingo Fetzer ◽  
Sabine Kleinsteuber ◽  
Roland Geyer ◽  
...  
Keyword(s):  
Flow Cytometry ◽  
Microbial Community ◽  
Community Dynamics ◽  
Microbial Community Dynamics ◽  
Natural Microbial Community ◽  
Community Fingerprinting

scholarly journals Assessment of Microbial Community Dynamics in River Bank Filtrate Using High-Throughput Sequencing and Flow Cytometry

2018 ◽  
Vol 9 ◽  
Author(s):  
Christina J. Fiedler ◽  
Christoph Schönher ◽  
Philipp Proksch ◽  
David Johannes Kerschbaumer ◽  
Ernest Mayr ◽  
...  
Keyword(s):  
Flow Cytometry ◽  
Microbial Community ◽  
High Throughput ◽  
High Throughput Sequencing ◽  
Community Dynamics ◽  
River Bank ◽  
Microbial Community Dynamics

Flow cytometry for rapid characterisation of microbial community dynamics in waste stabilisation ponds

2020 ◽  
Vol 169 ◽  
pp. 115243 ◽  
Author(s):  
Liah X. Coggins ◽  
Irma Larma ◽  
Amy Hinchliffe ◽  
Ruben Props ◽  
Anas Ghadouani
Keyword(s):  
Flow Cytometry ◽  
Microbial Community ◽  
Community Dynamics ◽  
Waste Stabilisation Ponds ◽  
Microbial Community Dynamics

scholarly journals Ecological Stability Properties of Microbial Communities Assessed by Flow Cytometry

mSphere ◽  
2018 ◽  
Vol 3 (1) ◽  
Author(s):  
Zishu Liu ◽  
Nicolas Cichocki ◽  
Fabian Bonk ◽  
Susanne Günther ◽  
Florian Schattenberg ◽  
...  
Keyword(s):  
Flow Cytometry ◽  
Microbial Community ◽  
Microbial Communities ◽  
Temporal Resolution ◽  
Community Dynamics ◽  
Well Being ◽  
High Temporal Resolution ◽  
Ecological Stability ◽  
Stability Properties ◽  
Microbial Community Dynamics

Microbial communities drive many processes which affect human well-being directly, as in the human microbiome, or indirectly, as in natural environments or in biotechnological applications. Due to their complexity, their dynamics over time is difficult to monitor, and current sequence-based approaches are limited with respect to the temporal resolution. However, in order to eventually control microbial community dynamics, monitoring schemes of high temporal resolution are required. Flow cytometry provides single-cell-based data in the required temporal resolution, and we here use such data to compute stability properties as easy to interpret univariate indicators of microbial community dynamics. Such monitoring tools will allow for a fast, continuous, and cost-effective screening of stability states of microbiomes. Applicable to various environments, including bioreactors, surface water, and the human body, it will contribute to the development of control schemes to manipulate microbial community structures and performances.

High resolution single cell analytics to follow microbial community dynamics in anaerobic ecosystems

Methods ◽  
2012 ◽  
Vol 57 (3) ◽  
pp. 338-349 ◽  
Author(s):  
Susann Müller ◽  
Thomas Hübschmann ◽  
Sabine Kleinsteuber ◽  
Carsten Vogt
Keyword(s):  
Microbial Community ◽  
High Resolution ◽  
Single Cell ◽  
Community Dynamics ◽  
Microbial Community Dynamics ◽  
Resolution Single

Performance and microbial community dynamics in bioaugmented aerated filter reactor treating with coking wastewater

2015 ◽  
Vol 190 ◽  
pp. 159-166 ◽  
Author(s):  
Shengnan Shi ◽  
Yuanyuan Qu ◽  
Qiao Ma ◽  
XuWang Zhang ◽  
Jiti Zhou ◽  
...  
Keyword(s):  
Microbial Community ◽  
Community Dynamics ◽  
Coking Wastewater ◽  
Microbial Community Dynamics ◽  
Aerated Filter

A comparative study of composting the solid fraction of dairy manure with or without bulking material: Performance and microbial community dynamics

2018 ◽  
Vol 247 ◽  
pp. 443-452 ◽  
Author(s):  
Xiao-Zhong Zhong ◽  
Shi-Chun Ma ◽  
Shi-Peng Wang ◽  
Ting-Ting Wang ◽  
Zhao-Yong Sun ◽  
...  
Keyword(s):  
Microbial Community ◽  
Comparative Study ◽  
Solid Fraction ◽  
Community Dynamics ◽  
Dairy Manure ◽  
Microbial Community Dynamics
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