Phylogenetic Analysis of Protein Family

2018 ◽  
pp. 267-275
Author(s):  
Letian Song ◽  
Sherry Wu ◽  
Adrian Tsang
Keyword(s):  
Phylogenetic Analysis ◽  
Protein Family

Phylogenetic Analysis Reveals a Novel Protein Family Closely Related to Adenosine Deaminase

2005 ◽  
Vol 61 (6) ◽  
pp. 776-794 ◽  
Author(s):  
Stephanie A. Maier ◽  
Julia R. Galellis ◽  
Heather E. McDermid
Keyword(s):  
Phylogenetic Analysis ◽  
Adenosine Deaminase ◽  
Protein Family ◽  
Novel Protein

scholarly journals New Insights on the Sialidase Protein Family Revealed by a Phylogenetic Analysis in Metazoa

PLoS ONE ◽  
2012 ◽  
Vol 7 (8) ◽  
pp. e44193 ◽  
Author(s):  
Edoardo Giacopuzzi ◽  
Roberto Bresciani ◽  
Roland Schauer ◽  
Eugenio Monti ◽  
Giuseppe Borsani
Keyword(s):  
Phylogenetic Analysis ◽  
Protein Family

scholarly journals An Insight into the Triabin Protein Family of American Hematophagous Reduviids: Functional, Structural and Phylogenetic Analysis

Toxins ◽  
2016 ◽  
Vol 8 (2) ◽  
pp. 44 ◽  
Author(s):  
María Hernández-Vargas ◽  
Carlos Santibáñez-López ◽  
Gerardo Corzo
Keyword(s):  
Phylogenetic Analysis ◽  
Protein Family ◽  
Insight Into

scholarly journals Evolution of the NET (NocA, Nlz, Elbow, TLP-1) protein family in metazoans: insights from expression data and phylogenetic analysis

2016 ◽  
Vol 6 (1) ◽  
Author(s):  
Filipe Pereira ◽  
Sara Duarte-Pereira ◽  
Raquel M. Silva ◽  
Luís Teixeira da Costa ◽  
Isabel Pereira-Castro
Keyword(s):  
Phylogenetic Analysis ◽  
Protein Family ◽  
Expression Data

scholarly journals Study of the DEEPER ROOTING 1 (DRO1) expression features in the cucumber (Cucumis sativus) root system architecture formation

2020 ◽  
Author(s):  
A. S. Kiryushkin ◽  
E. D. Guseva ◽  
E. L. Ilina ◽  
K. N. Demchenko
Keyword(s):  
Phylogenetic Analysis ◽  
Root System ◽  
Cucumis Sativus ◽  
System Architecture ◽  
Root System Architecture ◽  
Protein Family ◽  
Exogenous Auxin ◽  
Relative Expression

Identification of the cucumber DRO clade in IGT protein family was performed using phylogenetic analysis. Relative expression to the exogenous auxin and promoter tissue activity of the DRO genes were studied.

scholarly journals Emergence and evolution of the ERM proteins and merlin in metazoans

2019 ◽  
Author(s):  
V. Shabardina ◽  
Y. Kashima ◽  
Y. Suzuki ◽  
W. Makalowski
Keyword(s):  
Phylogenetic Analysis ◽  
Amino Acid ◽  
Cancer Progression ◽  
Tumor Suppression ◽  
Protein Family ◽  
Cytoskeletal Proteins ◽  
Cell Cortex ◽  
Cell Contact ◽  
Conserved Motifs ◽  
Erm Proteins

AbstractEzrin, radixin, moesin, and merlin are the cytoskeletal proteins which functions are specific to metazoans. They participate in cell cortex rearrangements, including cell-cell contact formation, and play important role in cancer progression. Here we perform a comprehensive phylogenetic analysis of the proteins spanning 87 species. The results describe a possible mechanism of the protein family origin in the root of Metazoa, paralogs diversification in vertebrates and acquisition of novel functions, including tumor suppression. In addition, a merlin paralog, present in most of vertebrates, but lost in mammals, has been described. We also highlight the set of amino acid variations within the conserved motifs as the candidates for determining physiological differences between the ERM paralogs.

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