Understanding the Functionality of a Biological System as a Whole: Comparative Data Analysis

Author(s):  
Isabel Orf
2018 ◽  
Vol 18 (2) ◽  
pp. 782-790 ◽  
Author(s):  
Praveen Kumar ◽  
Priyabrata Panigrahi ◽  
James Johnson ◽  
Wanda J. Weber ◽  
Subina Mehta ◽  
...  

2013 ◽  
pp. 1494-1521
Author(s):  
Jose M. Garcia-Manteiga

Metabolomics represents the new ‘omics’ approach of the functional genomics era. It consists in the identification and quantification of all small molecules, namely metabolites, in a given biological system. While metabolomics refers to the analysis of any possible biological system, metabonomics is specifically applied to disease and physiopathological situations. The data collected within these approaches is highly integrative of the other higher levels and is hence amenable to be explored with a top-down systems biology point of view. The aim of this chapter is to give a global view of the state of the art in metabolomics describing the two analytical techniques usually used to give rise to this kind of data, nuclear magnetic resonance, NMR, and mass spectrometry. In addition, the author will focus on the different data analysis tools that can be applied to such studies to extract information with special interest at the attempts to integrate metabolomics with other ‘omics’ approaches and its relevance in systems biology modeling.


Author(s):  
Jose M. Garcia-Manteiga

Metabolomics represents the new ‘omics’ approach of the functional genomics era. It consists in the identification and quantification of all small molecules, namely metabolites, in a given biological system. While metabolomics refers to the analysis of any possible biological system, metabonomics is specifically applied to disease and physiopathological situations. The data collected within these approaches is highly integrative of the other higher levels and is hence amenable to be explored with a top-down systems biology point of view. The aim of this chapter is to give a global view of the state of the art in metabolomics describing the two analytical techniques usually used to give rise to this kind of data, nuclear magnetic resonance, NMR, and mass spectrometry. In addition, the author will focus on the different data analysis tools that can be applied to such studies to extract information with special interest at the attempts to integrate metabolomics with other ‘omics’ approaches and its relevance in systems biology modeling.


2011 ◽  
Vol 30 (3) ◽  
pp. 891-900 ◽  
Author(s):  
Sebastian Bremm ◽  
Tatiana von Landesberger ◽  
Jürgen Bernard ◽  
Tobias Schreck

2009 ◽  
Vol 5 ◽  
pp. EBO.S2320 ◽  
Author(s):  
Francisco Prosdocimi ◽  
Brandon Chisham ◽  
Enrico Pontelli ◽  
Julie D. Thompson ◽  
Arlin Stoltzfus

2009 ◽  
pp. 195-214 ◽  
Author(s):  
Francisco Prosdocimi ◽  
Brandon Chisham ◽  
Enrico Pontelli ◽  
Arlin Stoltzfus ◽  
Julie D. Thompson

2012 ◽  
Author(s):  
Geoffrey M. Draper ◽  
Matthew G. Styles ◽  
Richard F. Riesenfeld

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