Integration of White Matter Tractography in Subcortical and Skull Base Neurosurgical Planning

2020 ◽  
pp. 245-264
Author(s):  
Melanie B. Fukui ◽  
Alejandro Monroy-Sosa ◽  
Srikant S. Chakravarthi ◽  
Jonathan E. Jennings ◽  
Richard A. Rovin ◽  
...  
Neurosurgery ◽  
2015 ◽  
Vol 79 (4) ◽  
pp. 568-577 ◽  
Author(s):  
Birkan Tunç ◽  
Madhura Ingalhalikar ◽  
Drew Parker ◽  
Jérémy Lecoeur ◽  
Nickpreet Singh ◽  
...  

Abstract BACKGROUND Advances in white matter tractography enhance neurosurgical planning and glioma resection, but white matter tractography is limited by biological variables such as edema, mass effect, and tract infiltration or selection biases related to regions of interest or fractional anisotropy values. OBJECTIVE To provide an automated tract identification paradigm that corrects for artifacts created by tumor edema and infiltration and provides a consistent, accurate method of fiber bundle identification. METHODS An automated tract identification paradigm was developed and evaluated for glioma surgery. A fiber bundle atlas was generated from 6 healthy participants. Fibers of a test set (including 3 healthy participants and 10 patients with brain tumors) were clustered adaptively with this atlas. Reliability of the identified tracts in both groups was assessed by comparison with 2 experts with the Cohen K used to quantify concurrence. We evaluated 6 major fiber bundles: cingulum bundle, fornix, uncinate fasciculus, arcuate fasciculus, inferior fronto-occipital fasciculus, and inferior longitudinal fasciculus, the last 3 tracts mediating language function. RESULTS The automated paradigm demonstrated a reliable and practical method to identify white mater tracts, despite mass effect, edema, and tract infiltration. When the tumor demonstrated significant mass effect or shift, the automated approach was useful for providing an initialization to guide the expert with identification of the specific tract of interest. CONCLUSION We report a reliable paradigm for the automated identification of white matter pathways in patients with gliomas. This approach should enhance the neurosurgical objective of maximal safe resections.


2017 ◽  
Vol 15 ◽  
pp. 659-672 ◽  
Author(s):  
Walid I. Essayed ◽  
Fan Zhang ◽  
Prashin Unadkat ◽  
G. Rees Cosgrove ◽  
Alexandra J. Golby ◽  
...  

Author(s):  
Jean M Vettel ◽  
Nicole Cooper ◽  
Javier O Garcia ◽  
Fang-Cheng Yeh ◽  
Timothy D Verstynen

2006 ◽  
Vol 25 (8) ◽  
pp. 965-978 ◽  
Author(s):  
O. Friman ◽  
G. Farneback ◽  
C.-F. Westin

Author(s):  
Junming Shao ◽  
Klaus Hahn ◽  
Qinli Yang ◽  
Afra Wohlschläeger ◽  
Christian Boehm ◽  
...  

Diffusion tensor magnetic resonance imaging (DTI) provides a promising way of estimating the neural fiber pathways in the human brain non-invasively via white matter tractography. However, it is difficult to analyze the vast number of resulting tracts quantitatively. Automatic tract clustering would be useful for the neuroscience community, as it can contribute to accurate neurosurgical planning, tract-based analysis, or white matter atlas creation. In this paper, the authors propose a new framework for automatic white matter tract clustering using a hierarchical density-based approach. A novel fiber similarity measure based on dynamic time warping allows for an effective and efficient evaluation of fiber similarity. A lower bounding technique is used to further speed up the computation. Then the algorithm OPTICS is applied, to sort the data into a reachability plot, visualizing the clustering structure of the data. Interactive and automatic clustering algorithms are finally introduced to obtain the clusters. Extensive experiments on synthetic data and real data demonstrate the effectiveness and efficiency of our fiber similarity measure and show that the hierarchical density-based clustering method can group these tracts into meaningful bundles on multiple scales as well as eliminating noisy fibers.


2010 ◽  
Vol 78 (1) ◽  
pp. 257-267 ◽  
Author(s):  
Evaggelos Pantelis ◽  
Nikolaos Papadakis ◽  
Kosmas Verigos ◽  
Irene Stathochristopoulou ◽  
Christos Antypas ◽  
...  

NeuroImage ◽  
2006 ◽  
Vol 29 (3) ◽  
pp. 868-878 ◽  
Author(s):  
Paul Thottakara ◽  
Mariana Lazar ◽  
Sterling C. Johnson ◽  
Andrew L. Alexander

2012 ◽  
Vol 32 (8) ◽  
pp. 2773-2782 ◽  
Author(s):  
A. S. Greenberg ◽  
T. Verstynen ◽  
Y.-C. Chiu ◽  
S. Yantis ◽  
W. Schneider ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document