Diffusion Equations in Biology

2010 ◽  
pp. 149-177 ◽  
Author(s):  
K.P. Hadeler
Keyword(s):  
Diffusion Equations

Computer Simulation of Amperometric Biosensor Response to Mixtures of Compounds

2002 ◽  
Vol 7 (2) ◽  
pp. 3-14 ◽  
Author(s):  
R. Baronas ◽  
J. Christensen ◽  
F. Ivanauskas ◽  
J. Kulys
Keyword(s):  
Computer Simulation ◽  
Enzymatic Reaction ◽  
Diffusion Equations ◽  
Response Data ◽  
Finite Difference Technique ◽  
Stationary Diffusion ◽  
Biosensor Array ◽  
Menten Kinetic ◽  
Biosensor Response

A mathematical model of amperometric biosensors has been developed. The model bases on non-stationary diffusion equations containing a non-linear term related to Michaelis-Menten kinetic of the enzymatic reaction. The model describes the biosensor response to mixtures of multiple compounds in two regimes of analysis: batch and flow injection. Using computer simulation, large amount of biosensor response data were synthesised for calibration of a biosensor array to be used for characterization of wastewater. The computer simulation was carried out using the finite difference technique.

Certain problems with the application of stochastic diffusion processes for description of chemical engineering phenomena; Kolmogorov and classic diffusion equations

1988 ◽  
Vol 53 (6) ◽  
pp. 1181-1197
Author(s):  
Vladimír Kudrna
Keyword(s):  
Mass Transfer ◽  
Partial Differential Equations ◽  
Differential Equations ◽  
Chemical Engineering ◽  
Diffusion Processes ◽  
Parabolic Type ◽  
Diffusion Equations ◽  
Stochastic Motion ◽  
Energy Component ◽  
Classic Form

The paper presents alternative forms of partial differential equations of the parabolic type used in chemical engineering for description of heat and mass transfer. It points at the substantial difference between the classic form of the equations, following from the differential balances of mass and enthalpy, and the form following from the concept of stochastic motion of particles of mass or energy component. Examples are presented of the processes that may be described by the latter method. The paper also reviews the cases when the two approaches become identical.

Certain problems with the application of stochastic diffusion processes for description of chemical engineering phenomena; Diffusion equations in curvilinear coordinates

1991 ◽  
Vol 56 (3) ◽  
pp. 602-618
Author(s):  
Vladimír Kudrna
Keyword(s):  
Heat Transfer ◽  
Mass Transport ◽  
Probability Density ◽  
Chemical Engineering ◽  
Diffusion Processes ◽  
Curvilinear Coordinates ◽  
Diffusion Equations ◽  
Parabolic Partial Differential Equations ◽  
Spherical Coordinates ◽  
Transformation Procedure

Parabolic partial differential equations used in chemical engineering for the description of mass transport and heat transfer and analogous relationship derived in stochastic processes theory are given. A standard transformation procedure is applied, allowing these relations to be generally written in curvilinear coordinates and particular expressions for cylindrical and spherical coordinates to be derived. The relation between the probability density for the position of a discernible particle and the concentration of a set of such particles is discussed.

scholarly journals Discrete effect on single-node boundary schemes of lattice Bhatnagar–Gross–Krook model for convection-diffusion equations

2019 ◽  
Vol 31 (01) ◽  
pp. 2050017
Author(s):  
Liang Wang ◽  
Xuhui Meng ◽  
Hao-Chi Wu ◽  
Tian-Hu Wang ◽  
Gui Lu
Keyword(s):  
Boundary Condition ◽  
Relaxation Time ◽  
Lattice Boltzmann ◽  
Diffusion Equations ◽  
Bgk Model ◽  
Distance Ratio ◽  
Single Node ◽  
Convection Diffusion ◽  
Velocity Models ◽  
Discrete Effect

The discrete effect on the boundary condition has been a fundamental topic for the lattice Boltzmann method (LBM) in simulating heat and mass transfer problems. In previous works based on the anti-bounce-back (ABB) boundary condition for convection-diffusion equations (CDEs), it is indicated that the discrete effect cannot be commonly removed in the Bhatnagar–Gross–Krook (BGK) model except for a special value of relaxation time. Targeting this point in this paper, we still proceed within the framework of BGK model for two-dimensional CDEs, and analyze the discrete effect on a non-halfway single-node boundary condition which incorporates the effect of the distance ratio. By analyzing an unidirectional diffusion problem with a parabolic distribution, the theoretical derivations with three different discrete velocity models show that the numerical slip is a combined function of the relaxation time and the distance ratio. Different from previous works, we definitely find that the relaxation time can be freely adjusted by the distance ratio in a proper range to eliminate the numerical slip. Some numerical simulations are carried out to validate the theoretical derivations, and the numerical results for the cases of straight and curved boundaries confirm our theoretical analysis. Finally, it should be noted that the present analysis can be extended from the BGK model to other lattice Boltzmann (LB) collision models for CDEs, which can broaden the parameter range of the relaxation time to approach 0.5.

An Adaptive Combined Preconditioner with Applications in Radiation Diffusion Equations

2015 ◽  
Vol 18 (5) ◽  
pp. 1313-1335 ◽  
Author(s):  
Xiaoqiang Yue ◽  
Shi Shu ◽  
Xiao wen Xu ◽  
Zhiyang Zhou
Keyword(s):  
Convergence Analysis ◽  
Estimation Theory ◽  
Numerical Results ◽  
Diffusion Equations ◽  
Condition Numbers ◽  
Radiation Diffusion ◽  
Discrete Problems ◽  
Preconditioned Gmres

AbstractThe paper aims to develop an effective preconditioner and conduct the convergence analysis of the corresponding preconditioned GMRES for the solution of discrete problems originating from multi-group radiation diffusion equations. We firstly investigate the performances of the most widely used preconditioners (ILU(k) and AMG) and their combinations (Bco and Bco), and provide drawbacks on their feasibilities. Secondly, we reveal the underlying complementarity of ILU(k) and AMG by analyzing the features suitable for AMG using more detailed measurements on multiscale nature of matrices and the effect of ILU(k) on multiscale nature. Moreover, we present an adaptive combined preconditioner Bcoα involving an improved ILU(0) along with its convergence constraints. Numerical results demonstrate that Bcoα-GMRES holds the best robustness and efficiency. At last, we analyze the convergence of GMRES with combined preconditioning which not only provides a persuasive support for our proposed algorithms, but also updates the existing estimation theory on condition numbers of combined preconditioned systems.

Sign in / Sign up

Export Citation Format

Share Document