scholarly journals Systematic Assessment of Performance Prediction Techniques in Medical Image Classification A Case Study on Celiac Disease

Author(s):  
Sebastian Hegenbart ◽  
Andreas Uhl ◽  
Andreas Vécsei
Information ◽  
2020 ◽  
Vol 11 (6) ◽  
pp. 318 ◽  
Author(s):  
Kamran Kowsari ◽  
Rasoul Sali ◽  
Lubaina Ehsan ◽  
William Adorno ◽  
Asad Ali ◽  
...  

Image classification is central to the big data revolution in medicine. Improved information processing methods for diagnosis and classification of digital medical images have shown to be successful via deep learning approaches. As this field is explored, there are limitations to the performance of traditional supervised classifiers. This paper outlines an approach that is different from the current medical image classification tasks that view the issue as multi-class classification. We performed a hierarchical classification using our Hierarchical Medical Image classification (HMIC) approach. HMIC uses stacks of deep learning models to give particular comprehension at each level of the clinical picture hierarchy. For testing our performance, we use biopsy of the small bowel images that contain three categories in the parent level (Celiac Disease, Environmental Enteropathy, and histologically normal controls). For the child level, Celiac Disease Severity is classified into 4 classes (I, IIIa, IIIb, and IIIC).


2020 ◽  
Vol 10 (10) ◽  
pp. 3359 ◽  
Author(s):  
Ibrahem Kandel ◽  
Mauro Castelli

Accurate classification of medical images is of great importance for correct disease diagnosis. The automation of medical image classification is of great necessity because it can provide a second opinion or even a better classification in case of a shortage of experienced medical staff. Convolutional neural networks (CNN) were introduced to improve the image classification domain by eliminating the need to manually select which features to use to classify images. Training CNN from scratch requires very large annotated datasets that are scarce in the medical field. Transfer learning of CNN weights from another large non-medical dataset can help overcome the problem of medical image scarcity. Transfer learning consists of fine-tuning CNN layers to suit the new dataset. The main questions when using transfer learning are how deeply to fine-tune the network and what difference in generalization that will make. In this paper, all of the experiments were done on two histopathology datasets using three state-of-the-art architectures to systematically study the effect of block-wise fine-tuning of CNN. Results show that fine-tuning the entire network is not always the best option; especially for shallow networks, alternatively fine-tuning the top blocks can save both time and computational power and produce more robust classifiers.


Diagnostics ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 1384
Author(s):  
Yin Dai ◽  
Yifan Gao ◽  
Fayu Liu

Over the past decade, convolutional neural networks (CNN) have shown very competitive performance in medical image analysis tasks, such as disease classification, tumor segmentation, and lesion detection. CNN has great advantages in extracting local features of images. However, due to the locality of convolution operation, it cannot deal with long-range relationships well. Recently, transformers have been applied to computer vision and achieved remarkable success in large-scale datasets. Compared with natural images, multi-modal medical images have explicit and important long-range dependencies, and effective multi-modal fusion strategies can greatly improve the performance of deep models. This prompts us to study transformer-based structures and apply them to multi-modal medical images. Existing transformer-based network architectures require large-scale datasets to achieve better performance. However, medical imaging datasets are relatively small, which makes it difficult to apply pure transformers to medical image analysis. Therefore, we propose TransMed for multi-modal medical image classification. TransMed combines the advantages of CNN and transformer to efficiently extract low-level features of images and establish long-range dependencies between modalities. We evaluated our model on two datasets, parotid gland tumors classification and knee injury classification. Combining our contributions, we achieve an improvement of 10.1% and 1.9% in average accuracy, respectively, outperforming other state-of-the-art CNN-based models. The results of the proposed method are promising and have tremendous potential to be applied to a large number of medical image analysis tasks. To our best knowledge, this is the first work to apply transformers to multi-modal medical image classification.


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