A Meta-learning Approach for Protein Function Prediction

Advanced Computational Approaches to Biomedical Engineering ◽

10.1007/978-3-642-41539-5_5 ◽

2013 ◽

pp. 113-128

Author(s):

Dariusz Plewczynski ◽

Subhadip Basu

Keyword(s):

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Learning Approach ◽

Download Full-text

A Deep Learning Approach Based on Stacked Denoising Autoencoders for Protein Function Prediction

2018 IEEE 42nd Annual Computer Software and Applications Conference (COMPSAC) ◽

10.1109/compsac.2018.00074 ◽

2018 ◽

Author(s):

Lester James Miranda ◽

Jinglu Hu

Keyword(s):

Deep Learning ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Learning Approach

Download Full-text

Human Protein Function Prediction Enhancement Using Decision Tree Based Machine Learning Approach

Communications in Computer and Information Science - Information, Communication and Computing Technology ◽

10.1007/978-981-15-1384-8_23 ◽

2019 ◽

pp. 279-293

Author(s):

Sunny Sharma ◽

Gurvinder Singh ◽

Rajinder Singh

Keyword(s):

Machine Learning ◽

Decision Tree ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Human Protein ◽

Learning Approach ◽

Machine Learning Approach

Download Full-text

Fast Target Set Reduction for Large-Scale Protein Function Prediction: A Multi-class Multi-label Machine Learning Approach

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/978-3-540-87361-7_17 ◽

2008 ◽

pp. 198-209 ◽

Author(s):

Thomas Lingner ◽

Peter Meinicke

Keyword(s):

Machine Learning ◽

Protein Function ◽

Large Scale ◽

Protein Function Prediction ◽

Function Prediction ◽

Learning Approach ◽

Machine Learning Approach ◽

Download Full-text

Faculty Opinions recommendation of Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.3674970.3396073 ◽

2010 ◽

Author(s):

Christine Orengo

Keyword(s):

Protein Function ◽

Protein Function Prediction ◽

Function Prediction

Download Full-text

Mask blast with a new chemical logic of amino acids for improved protein function prediction

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.26069 ◽

2021 ◽

Author(s):

Amita Pathak ◽

Toran Roy ◽

Avinash Edubilli ◽

Bhyravabhotla Jayaram

Keyword(s):

Amino Acids ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction

Download Full-text

DeepGOPlus: improved protein function prediction from sequence

Bioinformatics ◽

10.1093/bioinformatics/btaa763 ◽

2021 ◽

Author(s):

Maxat Kulmanov ◽

Robert Hoehndorf

Keyword(s):

Protein Function ◽

Protein Function Prediction ◽

Function Prediction

Download Full-text

Integrated protein function prediction by mining function associations, sequences, and protein–protein and gene–gene interaction networks

Methods ◽

10.1016/j.ymeth.2015.09.011 ◽

2016 ◽

Vol 93 ◽

pp. 84-91 ◽

Author(s):

Renzhi Cao ◽

Jianlin Cheng

Keyword(s):

Protein Function ◽

Protein Function Prediction ◽

Gene Interaction ◽

Function Prediction ◽

Interaction Networks ◽

Gene Interaction Networks

Download Full-text

Hierarchical multi-label classification for protein function prediction: A local approach based on neural networks

2011 11th International Conference on Intelligent Systems Design and Applications ◽

10.1109/isda.2011.6121678 ◽

2011 ◽

Author(s):

Ricardo Cerri ◽

Rodrigo C. Barros ◽

Andre C. P. L. F. de Carvalho

Keyword(s):

Neural Networks ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Download Full-text

ProLanGO: Protein Function Prediction Using Neural Machine Translation Based on a Recurrent Neural Network

Molecules ◽

10.3390/molecules22101732 ◽

2017 ◽

Vol 22 (10) ◽

pp. 1732 ◽

Author(s):

Renzhi Cao ◽

Colton Freitas ◽

Leong Chan ◽

Miao Sun ◽

Haiqing Jiang ◽

...

Keyword(s):

Neural Network ◽

Machine Translation ◽

Recurrent Neural Network ◽

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Neural Machine Translation

Download Full-text

Integration of relational and hierarchical network information for protein function prediction

BMC Bioinformatics ◽

10.1186/1471-2105-9-350 ◽

2008 ◽

Vol 9 (1) ◽

pp. 350 ◽

Author(s):

Xiaoyu Jiang ◽

Naoki Nariai ◽

Martin Steffen ◽

Simon Kasif ◽

Eric D Kolaczyk

Keyword(s):

Protein Function ◽

Protein Function Prediction ◽

Function Prediction ◽

Hierarchical Network ◽

Network Information

Download Full-text