Halomonas maris sp. nov., a moderately halophilic bacterium isolated from sediment in the southwest Indian Ocean

Author(s):  
Xu Qiu ◽  
Xiaorong Cao ◽  
Guangxin Xu ◽  
Huangming Wu ◽  
Xixiang Tang
2021 ◽  
Author(s):  
Xu Qiu ◽  
Xiaorong Cao ◽  
Guangxin Xu ◽  
Huangming Wu ◽  
Xixiang Tang

Abstract A halophilic, Gram-staining-negative, rod-shaped, flagellated and motile bacterium, strain QX-1T, was isolated from deep-sea sediment at a depth of 3332 m in the southwestern Indian Ocean. Strain QX-1T growth was observed at 4–50 °C (optimum 37 °C), pH 5.0–11.0 (optimum pH 7.0), 3%–25% NaCl (w/v; optimum 7%), and it did not grow without NaCl. A phylogenetic analysis based on the 16S rRNA gene placed strain QX-1T in the genus Halomonas and most closely related to Halomonas sulfidaeris (97.90%), Halomonas zhaodongensis (97.80%), Halomonas songnenensis (97.59%), Halomonas hydrothermalis (97.37%), Halomonas subterranea (97.25%), Halomonas salicampi (97.09%), and Halomonas arcis (97.01%). DNA–DNA hybridization (< 26.50%) and average nucleotide identity values (< 83.54%) between strain QX-1T and the related type strains meet the accepted criteria for a new species. The principal fatty acids (> 10%) of strain QX-1T are C16:0 (25.50%), C17:0 cyclo (14.02%), C19:0 cyclo ω8c (18.72%), and summed feature 8 (C18:1 ω7c and/or C18:1 ω6c, 18.08%). The polar lipids of strain QX-1T are mainly diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, unidentified phospholipid, unidentified aminophospholipid, and five unidentified lipids. The main respiratory quinone is Q-9. The G+C content of its chromosomal DNA is 54.4 mol%. Its fatty acid profile, respiratory quinones, and G+C content also support the placement of QX-1T in the genus Halomonas. These phylogenetic, phenotypic, and chemotaxonomic analyses indicate that QX-1T is a novel species, for which the name Halomonas maris is proposed. The type strain is QX-1T (=MCCC 1A17875T = KCTC 82198T = NBRC 114670T).


2011 ◽  
Vol 61 (5) ◽  
pp. 1127-1132 ◽  
Author(s):  
Xiaowei Wang ◽  
Yanfen Xue ◽  
Yanhe Ma

A Gram-stain-positive, rod-shaped, non-sporulating, motile and moderately halophilic bacterium, designated strain H96B60T, was isolated from a saline soil sample of the Qaidam basin, China. The strain was facultatively anaerobic. Major end products formed from glucose fermentation were acetate, ethanol and lactic acid. The cell-wall peptidoglycan contained meso-diaminopimelic acid as the diagnostic diamino acid. The isoprenoid quinone component was menaquinone-6 (MK-6). The predominant cellular fatty acids were C16 : 0, anteiso-C13 : 0 and anteiso-C15 : 0. The genomic DNA G+C content of strain H96B60T was 36.2 mol%. Phylogenetic analysis based on comparative 16S rRNA gene sequences indicated that strain H96B60T represented a novel phyletic lineage within the family Bacillaceae and was related most closely to Halolactibacillus species (96.1–96.4 % similarity). Based on the phenotypic, chemotaxonomic and phylogenetic data presented, strain H96B60T is considered to represent a novel species of a new genus, for which the name Streptohalobacillus salinus gen. nov., sp. nov. is proposed. The type strain of Streptohalobacillus salinus is H96B60T ( = DSM 22440T  = CGMCC 1.7733T).


2017 ◽  
Vol 199 (9) ◽  
pp. 1277-1281 ◽  
Author(s):  
Tong-Wei Guan ◽  
Lei Tian ◽  
En-Yuan Li ◽  
Shu-Kun Tang ◽  
Xiao-Ping Zhang

2019 ◽  
Vol 69 (5) ◽  
pp. 1313-1319 ◽  
Author(s):  
Zhuang Guo ◽  
Weicheng Li ◽  
Yurong Wang ◽  
Qiangchuan Hou ◽  
Huijun Zhao ◽  
...  

Author(s):  
Auttaporn Booncharoen ◽  
Wonnop Visessanguan ◽  
Nattakorn Kuncharoen ◽  
Supalurk Yiamsombut ◽  
Pannita Santiyanont ◽  
...  

An aerobic, Gram-stain-positive, endospore-forming, rod-shaped and moderately halophilic strain SKP4-6T, was isolated from shrimp paste (Ka-pi) collected from Samut Sakhon Province, Thailand. Phylogenetic analysis revealed that strain SKP4-6T belonged to the genus Halobacillus and was most closely related to Halobacillus salinus JCM 11546T (98.6 %), Halobacillus locisalis KCTC 3788T (98.6 %) and Halobacillus yeomjeoni KCTC 3957T (98.6 %) based on 16S rRNA gene sequence similarity. The digital DNA–DNA hybridization (dDDH) and average nucleotide identity (ANI) values between strain SKP4-6T and its related species were 18.2–19.3 % and 69.84–84.51 %, respectively, which were lower than the threshold recommended for species delineation. The strain grew optimally at 30–40 °C, at pH 7.0 and with 10–15 % (w/v) NaCl. It contained l-Orn–d-Asp in the cell wall peptidoglycan. The DNA G+C content was 44.8 mol%. The major fatty acids were iso-C15 : 0, anteiso-C15 : 0 and anteiso-C17 : 0. The predominant isoprenoid quinone was MK-7. Phosphatidylglycerol and diphosphatidylglycerol were present as major polar lipids. Based on this polyphasic approach, digital DNA–DNA relatedness and ANI values, strain SKP4-6T represents a novel species of the genus Halobacillus , for which the name Halobacillus fulvus sp. nov. is proposed. The type strain is SKP4-6T (=JCM 32624T=TISTR 2595T).


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