Genetic diversity and structure among Iranian tall fescue populations based on genomic-SSR and EST-SSR marker analysis

2009 ◽  
Vol 282 (1-2) ◽  
pp. 57-70 ◽  
Author(s):  
Majid Sharifi Tehrani ◽  
Mohsen Mardi ◽  
Jamal Sahebi ◽  
Pilar Catalán ◽  
Antonio Díaz-Pérez
Keyword(s):  
Genetic Diversity ◽  
Tall Fescue ◽  
Ssr Marker ◽  
Marker Analysis ◽  
Genetic Diversity And Structure ◽  
Genomic Ssr

Genetic diversity and structure of the zombi pea (Vigna vexillata (L.) A. Rich) gene pool based on SSR marker analysis

Genetica ◽  
2017 ◽  
Vol 145 (2) ◽  
pp. 189-200 ◽  
Author(s):  
Sujinna Dachapak ◽  
Prakit Somta ◽  
Supalak Poonchaivilaisak ◽  
Tarika Yimram ◽  
Peerasak Srinives
Keyword(s):  
Genetic Diversity ◽  
Gene Pool ◽  
Ssr Marker ◽  
Vigna Vexillata ◽  
Marker Analysis ◽  
Genetic Diversity And Structure

Genetic diversity and association mapping in a collection of selected Chinese soybean accessions based on SSR marker analysis

2011 ◽  
Vol 12 (5) ◽  
pp. 1145-1157 ◽  
Author(s):  
Ying-Hui Li ◽  
Marinus J. M. Smulders ◽  
Ru-Zhen Chang ◽  
Li-Juan Qiu
Keyword(s):  
Genetic Diversity ◽  
Association Mapping ◽  
Ssr Marker ◽  
Marker Analysis

Discovery and Utilization of EST-SSR Marker Resource for Genetic Diversity and Population Structure Analyses of a Subtropical Bamboo, Dendrocalamus hamiltonii

2019 ◽  
Vol 57 (5) ◽  
pp. 652-672 ◽  
Author(s):  
Abhishek Bhandawat ◽  
Vikas Sharma ◽  
Pradeep Singh ◽  
Romit Seth ◽  
Akshay Nag ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Ssr Marker ◽  
Dendrocalamus Hamiltonii

scholarly journals Genetic diversity and population structure of Plasmodium falciparum in Nigeria: insights from microsatellite loci analysis

2021 ◽  
Vol 20 (1) ◽  
Author(s):  
Fehintola V. Ajogbasile ◽  
Adeyemi T. Kayode ◽  
Paul E. Oluniyi ◽  
Kazeem O. Akano ◽  
Jessica N. Uwanibe ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Plasmodium Falciparum ◽  
Population Structure ◽  
Microsatellite Loci ◽  
Control Strategies ◽  
Population Diversity ◽  
Parasite Population ◽  
Nested Polymerase Chain Reaction ◽  
Public Health Burden ◽  
Genetic Diversity And Structure

Abstract Background Malaria remains a public health burden especially in Nigeria. To develop new malaria control and elimination strategies or refine existing ones, understanding parasite population diversity and transmission patterns is crucial. Methods In this study, characterization of the parasite diversity and structure of Plasmodium falciparum isolates from 633 dried blood spot samples in Nigeria was carried out using 12 microsatellite loci of P. falciparum. These microsatellite loci were amplified via semi-nested polymerase chain reaction (PCR) and fragments were analysed using population genetic tools. Results Estimates of parasite genetic diversity, such as mean number of different alleles (13.52), effective alleles (7.13), allelic richness (11.15) and expected heterozygosity (0.804), were high. Overall linkage disequilibrium was weak (0.006, P < 0.001). Parasite population structure was low (Fst: 0.008–0.105, AMOVA: 0.039). Conclusion The high level of parasite genetic diversity and low population structuring in this study suggests that parasite populations circulating in Nigeria are homogenous. However, higher resolution methods, such as the 24 SNP barcode and whole genome sequencing, may capture more specific parasite genetic signatures circulating in the country. The results obtained can be used as a baseline for parasite genetic diversity and structure, aiding in the formulation of appropriate therapeutic and control strategies in Nigeria.

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