Destabilization of the Alzheimer’s amyloid-β peptide by a proline-rich β-sheet breaker peptide: a molecular dynamics simulation study

Simulation Study ◽

Amyloid Β ◽

Dynamics Simulation ◽

Amyloid Β Peptide ◽

Norepinephrine Inhibits Alzheimer’s Amyloid-β Peptide Aggregation and Destabilizes Amyloid-β Protofibrils: A Molecular Dynamics Simulation Study

ACS Chemical Neuroscience ◽

10.1021/acschemneuro.8b00537 ◽

2019 ◽

Vol 10 (3) ◽

pp. 1585-1594 ◽

Cited By ~ 25

Author(s):

Yu Zou ◽

Zhenyu Qian ◽

Yujie Chen ◽

Hongsheng Qian ◽

Guanghong Wei ◽

...

Keyword(s):

Molecular Dynamics ◽

Simulation Study ◽

Amyloid Β ◽

Dynamics Simulation ◽

Amyloid Β Peptide ◽

Peptide Aggregation

Enhancing the binding of the β-sheet breaker peptide LPFFD to the amyloid-β fibrils by aromatic modifications: A molecular dynamics simulation study

Computational Biology and Chemistry ◽

10.1016/j.compbiolchem.2021.107471 ◽

2021 ◽

Vol 92 ◽

pp. 107471

Author(s):

Pavan Krishna Kanchi ◽

Ashok Kumar Dasmahapatra

Keyword(s):

Molecular Dynamics ◽

Simulation Study ◽

Amyloid Β ◽

Dynamics Simulation ◽

Destabilization of the Alzheimer’s amyloid-β protofibrils by THC: A molecular dynamics simulation study

Journal of Molecular Graphics and Modelling ◽

10.1016/j.jmgm.2021.107889 ◽

2021 ◽

Vol 105 ◽

pp. 107889

Author(s):

Pavan Krishna Kanchi ◽

Ashok Kumar Dasmahapatra

Keyword(s):

Molecular Dynamics ◽

Simulation Study ◽

Amyloid Β ◽

Dynamics Simulation

On the Structural Stability of a Short Three Stranded β-sheet Peptide (Betanova): Replica Exchange Molecular Dynamics Simulation Study

Bulletin of the Korean Chemical Society ◽

10.5012/bkcs.2010.31.8.2386 ◽

2010 ◽

Vol 31 (8) ◽

pp. 2386-2388

Author(s):

Soon-Min Jang ◽

Eun-Ae Kim ◽

Young-Shang Pak

Keyword(s):

Molecular Dynamics ◽

Structural Stability ◽

Simulation Study ◽

Dynamics Simulation ◽

Replica Exchange ◽

Replica Exchange Molecular Dynamics ◽

Stability of the β-Sheet of the WW Domain: A Molecular Dynamics Simulation Study

Biophysical Journal ◽

10.1016/s0006-3495(99)77059-1 ◽

1999 ◽

Vol 77 (4) ◽

pp. 2191-2198 ◽

Cited By ~ 38

Author(s):

Gulshat T. Ibragimova ◽

Rebecca C. Wade

Keyword(s):

Molecular Dynamics ◽

Simulation Study ◽

Dynamics Simulation ◽

Ww Domain ◽

Structural stabilization of a rigid β-sheet cluster of fucosylated proteinase inhibitor PMPC (Pars intercerebralis major peptide C) against thermal denaturation: An unfolding molecular dynamics simulation study

Journal of Molecular Graphics and Modelling ◽

10.1016/j.jmgm.2009.11.003 ◽

2010 ◽

Vol 28 (6) ◽

pp. 487-494 ◽

Cited By ~ 2

Author(s):

Youngjin Choi ◽

Hyunmyung Kim ◽

Jong Hyun Lee ◽

Sungjun Park ◽

Karpjoo Jeong ◽

...

Keyword(s):

Molecular Dynamics ◽

Simulation Study ◽

Proteinase Inhibitor ◽

Thermal Denaturation ◽

Dynamics Simulation ◽

Pars Intercerebralis ◽

Structural Stabilization ◽

The effect of solvents on the conformations of Amyloid β-peptide (1–42) studied by molecular dynamics simulation

Journal of Molecular Structure THEOCHEM ◽

10.1016/j.theochem.2008.10.003 ◽

2009 ◽

Vol 895 (1-3) ◽

pp. 1-8 ◽

Cited By ~ 32

Author(s):

Cao Yang ◽

Jinyu Li ◽

Yu Li ◽

Xiaolei Zhu

Keyword(s):

Molecular Dynamics ◽

Amyloid Β ◽

Dynamics Simulation ◽

Amyloid Β Peptide ◽

Effect Of Solvents

A cylinder-shaped double ribbon structure formed by an amyloid hairpin peptide derived from the β-sheet of murine PrP: An X-ray and molecular dynamics simulation study

Journal of Structural Biology ◽

10.1016/j.jsb.2005.03.003 ◽

2005 ◽

Vol 150 (3) ◽

pp. 284-299 ◽

Cited By ~ 6

Author(s):

Vincent Croixmarie ◽

Fatma Briki ◽

Gabriel David ◽

Yves-Marie Coïc ◽

Ludmila Ovtracht ◽

...

Keyword(s):

Molecular Dynamics ◽

Simulation Study ◽

Dynamics Simulation ◽

X Ray ◽

Ribbon Structure ◽

Ligand field molecular dynamics simulation of Pt(II)-phenanthroline binding to N-terminal fragment of amyloid-β peptide

PLoS ONE ◽

10.1371/journal.pone.0193668 ◽

2018 ◽

Vol 13 (3) ◽

pp. e0193668 ◽

Cited By ~ 4

Author(s):

Matthew Turner ◽

Shaun T. Mutter ◽

Robert J. Deeth ◽

James A. Platts

Keyword(s):

Molecular Dynamics ◽

Amyloid Β ◽

Dynamics Simulation ◽

Ligand Field ◽

Amyloid Β Peptide ◽

Terminal Fragment

Binding, Conformational Transition and Dimerization of Amyloid-β Peptide on GM1-Containing Ternary Membrane: Insights from Molecular Dynamics Simulation

PLoS ONE ◽

10.1371/journal.pone.0071308 ◽

2013 ◽

Vol 8 (8) ◽

pp. e71308 ◽

Cited By ~ 39

Author(s):

Moutusi Manna ◽

Chaitali Mukhopadhyay

Keyword(s):

Molecular Dynamics ◽

Conformational Transition ◽

Amyloid Β ◽

Dynamics Simulation ◽

Amyloid Β Peptide