scholarly journals Binding, Conformational Transition and Dimerization of Amyloid-β Peptide on GM1-Containing Ternary Membrane: Insights from Molecular Dynamics Simulation

PLoS ONE ◽  
2013 ◽  
Vol 8 (8) ◽  
pp. e71308 ◽  
Author(s):  
Moutusi Manna ◽  
Chaitali Mukhopadhyay
Keyword(s):  
Molecular Dynamics ◽  
Molecular Dynamics Simulation ◽  
Conformational Transition ◽  
Amyloid Β ◽  
Dynamics Simulation ◽  
Amyloid Β Peptide

Investigation of the interaction of amyloid β peptide (11–42) oligomers with a 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) membrane using molecular dynamics simulation

2018 ◽  
Vol 20 (10) ◽  
pp. 6817-6829 ◽  
Author(s):  
Ning Xiang ◽  
Yuan Lyu ◽  
Xiao Zhu ◽  
Ganesan Narsimhan
Keyword(s):  
Molecular Dynamics ◽  
Molecular Dynamics Simulation ◽  
Pore Formation ◽  
Amyloid Β ◽  
Dynamics Simulation ◽  
Amyloid Β Peptide ◽  
Aβ Oligomers ◽  
Aβ Peptides ◽  
Amyloid Aβ ◽  
Β Amyloid

The mechanism of pore formation in model neural cell membranes by β amyloid (Aβ) peptides was investigated using molecular dynamics simulation which indicated that Aβ oligomers of size equal or greater than 3 has a higher tendency for pore formation than monomers and that cholesterol tends to retard Aβ binding and insertion into the membrane.

scholarly journals Correction: Probing intrinsic dynamics and conformational transition of HIV gp120 by molecular dynamics simulation

RSC Advances ◽  
2020 ◽  
Vol 10 (61) ◽  
pp. 36988-36988
Author(s):  
Yi Li ◽  
Xiao-Ling Zhang ◽  
Xue Yuan ◽  
Jiang-Chun Hou ◽  
Peng Sang ◽  
...  
Keyword(s):  
Molecular Dynamics ◽  
Molecular Dynamics Simulation ◽  
Conformational Transition ◽  
Dynamics Simulation ◽  
Hiv Gp120

Correction for ‘Probing intrinsic dynamics and conformational transition of HIV gp120 by molecular dynamics simulation’ by Yi Li et al., RSC Adv., 2020, 10, 30499–30507, DOI: 10.1039/d0ra06416e.

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