Construction of a Genetic Linkage Map and Mapping of a Female-Specific DNA Marker in Half-Smooth Tongue Sole (Cynoglossus semilaevis)

2009 ◽  
Vol 11 (6) ◽  
pp. 699-709 ◽  
Author(s):  
Xiaolin Liao ◽  
Hong-Yu Ma ◽  
Gen-Bo Xu ◽  
Chang-Wei Shao ◽  
Yong-Sheng Tian ◽  
...  
2013 ◽  
Vol 9 ◽  
pp. 17-23 ◽  
Author(s):  
Liming Jiang ◽  
Guannan Chu ◽  
Quanqi Zhang ◽  
Zhigang Wang ◽  
Xubo Wang ◽  
...  

2013 ◽  
Vol 59 (1) ◽  
pp. 99-108 ◽  
Author(s):  
Wentao Song ◽  
Guidong Miao ◽  
Yongwei Zhao ◽  
Yuze Niu ◽  
Renyi Pang ◽  
...  

Abstract The half-smooth tongue sole Cynoglossus semilaevis is an important cultured marine fish and a promising model fish for the study of sex determination. Sex-specific genetic linkage maps of half-smooth tongue sole were developed with 567 markers (565 microsatellite markers and two SCAR markers). The parents and F1 progeny (92 individuals) were used as segregating populations. The female map was composed of 480 markers in 21 linkage groups, covering a total of 1388.1 cM, with an average interval 3.06 cM between markers. The male map consisted of 417 markers in 21 linkage groups, spanning 1480.9 cM, with an average interval of 3.75 cM. The female and male maps had 474 and 416 unique positions, respectively. The genome length of half-smooth tongue sole was estimated to be 1522.9 cM for females and 1649.1cM for males. Based on estimations of map length, the female and male maps covered 91.1% and 89.8% of the genome, respectively. Furthermore, two female-specific SCAR markers, f-382 and f-783, were mapped on LG15f (linkage group 15 in female maps). The present study presents a mid-density genetic linkage map for half-smooth tongue sole. These improved genetic linkage maps may facilitate systematic genome searches to identify quantitative trait loci (QTL), such as disease resistance, growth and sex-related traits, and are very useful for marker-assisted selection breeding programs for economically important traits in half-smooth tongue sole.


Aquaculture ◽  
2013 ◽  
Vol 388-391 ◽  
pp. 49-53 ◽  
Author(s):  
Xubo Wang ◽  
Jiajun Jiang ◽  
Jinning Gao ◽  
Jinxiang Liu ◽  
Jie Qi ◽  
...  

2007 ◽  
Vol 9 (2) ◽  
pp. 273-280 ◽  
Author(s):  
Song-Lin Chen ◽  
Jing Li ◽  
Si-Ping Deng ◽  
Yong-Sheng Tian ◽  
Qing-Yin Wang ◽  
...  

2009 ◽  
Vol 55 (4) ◽  
pp. 309-314 ◽  
Author(s):  
Hongyu Ma ◽  
Songlin Chen ◽  
Jing Li ◽  
Jin-Zhen Bi ◽  
Tianjun Xu

Abstract Two female-specific AFLP (amplified fragment length polymorphism) markers (named CseF464 and CseF136) were isolated by using one selective primer combination (E-AGC/M-CTG) from the genomic DNA of 20 females and 20 males of the half-smooth tongue sole Cynoglossus semilaevis. Both the markers were re-amplified, recovered from the agarose gels, cloned and sequenced. Bioinformatics analysis indicated that the length of the two markers were 468 bp and 134 bp, respectively, and the sequences showed no similarity to each other, as well as to the known sequences deposited in the GenBank database using BLASTn. Two pairs of SCAR (sequence characterized amplified regions) primers were designed based on the sequences of the two female-specific markers. Furthermore, PCR-based genetic sex identification method was developed in Cynoglossus semilaevis. A specific fragment was amplified in all females but not in any males by using these SCAR primers on the initial 20 female and 20 male individuals of Cynoglossus semilaevis. The feasibility of the two SCAR primer pairs was confirmed in additional 100 individuals (50 females and 50 males). This allowed for reliable, rapid molecular identification of genetic sex of the species, genetic mapping on the sex chromosomes and better understanding of the sex determination and sex differentiation in the half smooth tongue sole.


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