Targeting polyketide synthase gene pool within actinomycetes: new degenerate primers

2006 ◽  
Vol 33 (6) ◽  
pp. 423-430 ◽  
Author(s):  
Miloje Savic ◽  
Branka Vasiljevic
2005 ◽  
Vol 71 (7) ◽  
pp. 3453-3457 ◽  
Author(s):  
Takeo Shimizu ◽  
Hiroshi Kinoshita ◽  
Shinji Ishihara ◽  
Kanae Sakai ◽  
Shiro Nagai ◽  
...  

ABSTRACT Citrinin produced by Aspergillus, Penicillium, and Monascus species is a polyketide compound that has nephrotoxic activity in mammals and is bactericidal toward gram-positive bacteria. To avoid the risk of citrinin contamination in other fermentation products produced by Monascus purpureus, knowledge of the citrinin biosynthetic genes is needed so that citrinin-nonproducing strains can be generated. We cloned a polyketide synthase (PKS) gene from M. purpureus with degenerate primers designed to amplify the conserved region of a ketosynthase domain of a fungal PKS. A 13-kb genomic DNA fragment was identified that contained a full-length PKS gene (pksCT) of 7,838 bp with a single 56-bp intron. pksCT encodes a 2,593-amino-acid protein that contains putative domains for ketosynthase, acyltransferase, acyl carrier protein (ACP), and a rare methyltransferase. There was no obvious thioesterase domain, which usually is downstream of the ACP domain in multi-aromatic-ring PKSs. pksCT transcription was correlated with citrinin production, suggesting that the pksCT gene product was involved in citrinin biosynthesis. Homologous recombination between the wild-type allele and a truncated disruption construct resulted in a pksCT-disrupted strain of M. purpureus. The disruptant did not produce citrinin, but a pksCT revertant generated by successive endogenous recombination events in the pksCT disruptant restored citrinin production, indicating that pksCT encoded the PKS responsible for citrinin biosynthesis in M. purpureus.


2016 ◽  
Vol 79 (6) ◽  
pp. 1485-1491 ◽  
Author(s):  
Po-Wei Yu ◽  
Ya-Chih Chang ◽  
Ruey-Fen Liou ◽  
Tzong-Huei Lee ◽  
Shean-Shong Tzean

PLoS ONE ◽  
2018 ◽  
Vol 13 (7) ◽  
pp. e0199110 ◽  
Author(s):  
Yi Wang ◽  
Changan Geng ◽  
Xiaolong Yuan ◽  
Mei Hua ◽  
Fenghua Tian ◽  
...  

1998 ◽  
Vol 187 (2) ◽  
pp. 79-89 ◽  
Author(s):  
K. Langfelder ◽  
Bernhard Jahn ◽  
Heike Gehringer ◽  
Axel Schmidt ◽  
Gerhard Wanner ◽  
...  

2007 ◽  
Vol 6 (7) ◽  
pp. 1210-1218 ◽  
Author(s):  
Daren W. Brown ◽  
Robert A. E. Butchko ◽  
Mark Busman ◽  
Robert H. Proctor

ABSTRACT Fumonisins are mycotoxins produced by some Fusarium species and can contaminate maize or maize products. Ingestion of fumonisins is associated with diseases, including cancer and neural tube defects, in humans and animals. In fungi, genes involved in the synthesis of mycotoxins and other secondary metabolites are often located adjacent to each other in gene clusters. Such genes can encode structural enzymes, regulatory proteins, and/or proteins that provide self-protection. The fumonisin biosynthetic gene cluster includes 16 genes, none of which appear to play a role in regulation. In this study, we identified a previously undescribed gene (FUM21) located adjacent to the fumonisin polyketide synthase gene, FUM1. The presence of a Zn(II)2Cys6 DNA-binding domain in the predicted protein suggested that FUM21 was involved in transcriptional regulation. FUM21 deletion (Δfum21) mutants produce little to no fumonisin in cracked maize cultures but some FUM1 and FUM8 transcripts in a liquid GYAM medium. Complementation of a Δfum21 mutant with a wild-type copy of the gene restored fumonisin production. Analysis of FUM21 cDNAs identified four alternative splice forms (ASFs), and microarray analysis indicated the ASFs were differentially expressed. Based on these data, we present a model for how FUM21 ASFs may regulate fumonisin biosynthesis.


2017 ◽  
Vol 121 (8) ◽  
pp. 664-675 ◽  
Author(s):  
Wachiraporn Toopaang ◽  
Suranat Phonghanpot ◽  
Juntira Punya ◽  
Cheerapha Panyasiri ◽  
Kewarin Klamchao ◽  
...  

2006 ◽  
Vol 72 (12) ◽  
pp. 7941-7944 ◽  
Author(s):  
Nicole B. Lopanik ◽  
Nancy M. Targett ◽  
Niels Lindquist

ABSTRACT “Candidatus Endobugula sertula,” the uncultured microbial symbiont of the bryozoan Bugula neritina, produces ecologically and biomedically important polyketide metabolites called bryostatins. We isolated two gene fragments from B. neritina larvae that have high levels of similarity to polyketide synthase genes. These gene fragments are clearly associated with the symbiont and not with the host.


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