scholarly journals Correction to: Characterization of three soybean landraces resistant to Asian soybean rust disease

2020 ◽  
Vol 40 (8) ◽  
Author(s):  
Luciano Nobuhiro Aoyagi ◽  
Yukie Muraki ◽  
Naoki Yamanaka
2020 ◽  
Vol 40 (6) ◽  
Author(s):  
Luciano Nobuhiro Aoyagi ◽  
Yukie Muraki ◽  
Naoki Yamanaka

Abstract Phakopsora pachyrhizi is an obligatory biotrophic fungus that causes Asian soybean rust (ASR) disease. ASR control primarily involves chemical control and the use of resistant soybean cultivars carrying an Rpp (resistance to P. pachyrhizi) gene. This study aimed to characterize the ASR resistance of three soybean Asian landraces. By screening the world core collection (WC) of soybean, which consists of 80 varieties, three landraces were identified in Southeast Asia as resistant to ASR. Genetic mapping using the F2 population derived from a cross with an ASR-susceptible variety, BRS 184, indicated that KS 1034 (WC2) has ASR resistance conferred by a single dominant resistance gene, mapped on chromosome 18, in the same region where Rpp1 was mapped previously. The BRS 184 × WC61 (COL/THAI/1986/THAI-80) F2 population, on the other hand, showed an ASR resistance locus mapped by quantitative trait locus analysis on chromosome 6, in the region where the resistance conferred by PI 416764 Rpp3 resides, with a logarithm of the odds score peak at the same position as the marker, Satt079, while the BRS 184 × WC51 (HM 39) population showed the resistance to ASR allocated between Satt079 and Sat_263 markers, also in the region where Rpp3 was mapped previously. Both WC51 and WC61 have the same infection profile as FT-2 and PI 462312 when tested against the same ASR isolate panel. These three WCs can be used in MAS programs for introgression of Rpp1 and Rpp3 and the development of ASR-resistant cultivars in the breeding program.


2010 ◽  
Vol 33 (2) ◽  
pp. 354-358 ◽  
Author(s):  
Talles Eduardo Ferreira Maciel ◽  
Maíra Cristina Menezes Freire ◽  
Álvaro M.R. de Almeida ◽  
Luiz Orlando de Oliveira

2013 ◽  
Vol 36 (2) ◽  
pp. 214-224 ◽  
Author(s):  
Lauro Bücker Neto ◽  
Rafael Rodrigues de Oliveira ◽  
Beatriz Wiebke-Strohm ◽  
Marta Bencke ◽  
Ricardo Luís Mayer Weber ◽  
...  

2008 ◽  
Vol 21 (11) ◽  
pp. 1421-1430 ◽  
Author(s):  
Marco Loehrer ◽  
Caspar Langenbach ◽  
Katharina Goellner ◽  
Uwe Conrath ◽  
Ulrich Schaffrath

Asian soybean rust (ASR), caused by Phakopsora pachyrhizi, is a devastating disease of soybean. We report the use of the nonhost plant Arabidopsis thaliana to identify the genetic basis of resistance to P. pachyrhizi. Upon attack by P. pachyrhizi, epidermal cells of wild-type Arabidopsis accumulated H2O2, which likely orchestrates the frequently observed epidermal cell death. However, even when epidermal cell death occurred, fungal hyphae grew on and infection was terminated at the mesophyll boundary. These events were associated with expression of PDF1.2, suggesting that P. pachyrhizi, an ostensible biotroph, mimics aspects of a necrotroph. Extensive colonization of the mesophyll occurred in Arabidopsis pen mutants with defective penetration resistance. Although haustoria were found occasionally in mesophyll cells, the successful establishment of biotrophy failed, as evidenced by the cessation of fungal growth. Double mutants affected in either jasmonic acid or salicylic acid signaling in the pen3-1 background revealed the involvement of both pathways in nonhost resistance (NHR) of Arabidopsis to P. pachyrhizi. Interestingly, expression of AtNHL10, a gene that is expressed in tissue undergoing the hypersensitive response, was only triggered in infected pen3-1 mutants. Thus, a suppression of P. pachyrhizi–derived effectors by PEN3 can be inferred. Our results demonstrate that Arabidopsis can be used to study mechanisms of NHR to ASR.


2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Henry Cavanagh ◽  
Andreas Mosbach ◽  
Gabriel Scalliet ◽  
Rob Lind ◽  
Robert G. Endres

AbstractMedicines and agricultural biocides are often discovered using large phenotypic screens across hundreds of compounds, where visible effects of whole organisms are compared to gauge efficacy and possible modes of action. However, such analysis is often limited to human-defined and static features. Here, we introduce a novel framework that can characterize shape changes (morphodynamics) for cell-drug interactions directly from images, and use it to interpret perturbed development of Phakopsora pachyrhizi, the Asian soybean rust crop pathogen. We describe population development over a 2D space of shapes (morphospace) using two models with condition-dependent parameters: a top-down Fokker-Planck model of diffusive development over Waddington-type landscapes, and a bottom-up model of tip growth. We discover a variety of landscapes, describing phenotype transitions during growth, and identify possible perturbations in the tip growth machinery that cause this variation. This demonstrates a widely-applicable integration of unsupervised learning and biophysical modeling.


2020 ◽  
Author(s):  
Lisa Cabre ◽  
Stephane Peyrard ◽  
Catherine Sirven ◽  
Laurine Gilles ◽  
Bernard Pelissier ◽  
...  

ABSTRACTBackgroundPhakopsora pachyrhizi is a biotrophic fungal pathogen responsible for the Asian soybean rust disease causing important yield losses in tropical and subtropical soybean-producing countries. P. pachyrhizi triggers important transcriptional changes in soybean plants during infection, with several hundreds of genes being either up- or downregulated.ResultsBased on published transcriptomic data, we identified a predicted chitinase gene, referred to as GmCHIT1, that was upregulated in the first hours of infection. We first confirmed this early induction and showed that this gene was expressed as early as 8 hours after P. pachyrhizi inoculation. To investigate the promoter of GmCHIT1, transgenic soybean plants expressing the green fluorescence protein (GFP) under the control of the GmCHIT1 promoter were generated. Following inoculation of these transgenic plants with P. pachyrhizi, GFP fluorescence was detected in a limited area located around appressoria, the fungal penetration structures. Fluorescence was also observed after mechanical wounding whereas no variation in fluorescence of pGmCHIT1:GFP transgenic plants was detected after a treatment with an ethylene precursor or a methyl jasmonate analogue.ConclusionWe identified a soybean chitinase promoter exhibiting an early induction by P. pachyrhizi located in the first infected soybean leaf cells. Our results on the induction of GmCHIT1 promoter by P. pachyrhizi contribute to the identification of a new pathogen inducible promoter in soybean and beyond to the development of a strategy for the Asian soybean rust disease control using biotechnological approaches.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
L. Cabre ◽  
S. Peyrard ◽  
C. Sirven ◽  
L. Gilles ◽  
B. Pelissier ◽  
...  

Abstract Background Phakopsora pachyrhizi is a biotrophic fungal pathogen responsible for the Asian soybean rust disease causing important yield losses in tropical and subtropical soybean-producing countries. P. pachyrhizi triggers important transcriptional changes in soybean plants during infection, with several hundreds of genes being either up- or downregulated. Results Based on published transcriptomic data, we identified a predicted chitinase gene, referred to as GmCHIT1, that was upregulated in the first hours of infection. We first confirmed this early induction and showed that this gene was expressed as early as 8 h after P. pachyrhizi inoculation. To investigate the promoter of GmCHIT1, transgenic soybean plants expressing the green fluorescence protein (GFP) under the control of the GmCHIT1 promoter were generated. Following inoculation of these transgenic plants with P. pachyrhizi, GFP fluorescence was detected in a limited area located around appressoria, the fungal penetration structures. Fluorescence was also observed after mechanical wounding whereas no variation in fluorescence of pGmCHIT1:GFP transgenic plants was detected after a treatment with an ethylene precursor or a methyl jasmonate analogue. Conclusion We identified a soybean chitinase promoter exhibiting an early induction by P. pachyrhizi located in the first infected soybean leaf cells. Our results on the induction of GmCHIT1 promoter by P. pachyrhizi contribute to the identification of a new pathogen inducible promoter in soybean and beyond to the development of a strategy for the Asian soybean rust disease control using biotechnological approaches.


Plant Disease ◽  
2005 ◽  
Vol 89 (6) ◽  
pp. 684-684 ◽  
Author(s):  
R. N. Pioli ◽  
M. V. Cambursano ◽  
E. N. Morandi

The Asian soybean rust caused by the fungus Phakopsora pachyrhizi was cited for the first time in Argentina during the 2002-2003 growing season (3). During 2003-2004, the disease spread to other northern provinces and was also observed in north-central Santa Fe, the main producing soybean province of the country. Because the disease appeared at the end of the crop growing season (late March to early April) it had little or no impact on crop yields. The objectives of this study were to characterize morphologically and pathometrically the disease on soybean and check the presence of P. pachyrhizi on volunteer soybean plants that could eventually carry the disease to the next growing season. The study was conducted in the San Justo Department, Santa Fe Province (between 30 and 31°S latitude), where the presence of the soybean rust was molecularly confirmed by Sistema Nacional Vigilancia y Monitoreo (on-line publication at www.sinavimo.gov.ar ). Three field locations were sampled and identified as M1, M2, and M3. Transversal cuts of soybean leaves through rust lesions and histo-pathological staining were used for micromor-phologic characterization of the developmental stages of P. pachyrhizi. The disease incidence was estimated as the proportion of affected soybean plants and leaves. Average severity, expressed as the percentage of leaf area affected, including chlorosis, was measured on the terminal leaflet of leaves sampled from the lower one-third of the canopy. Three replicates of 10 plants, randomly chosen, were used. The number of uredinia per square centimeter and per lesion (symptomatic foliar area showing chlorosis and necrosis caused by the fungus) was measured on the undersides of the sampled leaflets at ×40 magnification (1). Typical signs and symptoms of P. pachyrhizi coexisted on soybean leaves with brown spot (Septoria glycines), downy mildew (Peronospora manshurica), anthracnose (Colletotrichum truncatum), and blight and leaf spot (Cercospora kikuchii) and also with bacteria (Pseudomonas and Xanthomonas spp.). Uredinia and telia of the P. pachyrhizi cycle were observed. Uredinia were also observed on soybean petioles. The average size of urediniospores (n = 60) was 23.3 × 16.6 μm. Telia were located adjacent to the uredinia. These telia were dark and crusty with four stacked layers of teliospores. Rust incidence in plants was 100% for the three fields, while the incidence in leaves was 100% for M1 and M2 and 60% for M3. Average disease severity was 50.3, 25.6, and 14.8% for M1, M2, and M3, respectively. The mean number of uredinia per square centimeter was 327, 179, and 177, for M1, M2, and M3, respectively. The number of uredinia per lesion ranged from 1 to 6. P. pachyrhizi was also found on volunteer soybean plants that emerged shortly after harvest. On 40 leaflets, the foliar incidence was 25%, showing one to two lesions with one to two uredinios per leaflet (2). The volunteer soybean plants could constitute a potential early source of inoculum. References: (1) M. Marcchetti et al. Phytopathology. 66:461, 1976. (2) R. Pioli et al. La roya asiática en Santa. Fe, Arg. XII Cong. AAPRESID, II Sem. Internac. Soja, Arg. 283–290, 2004. (3) R. L. Rossi. Plant Dis. 87:102, 2003.


2010 ◽  
Vol 10 (3) ◽  
pp. 197-203 ◽  
Author(s):  
Milena Moura de Araujo ◽  
Natal Antonio Vello

Our objective was to characterize soybean experimental lines for Asian soybean rust reaction. In the 2004/2005 growing season, three experiments were conducted with middle-cycle and three with late-cycle genotypes, designed in randomized blocks with four replications. Twelve experimental lines and two cultivars of each cycle were used. In each experiment the plant management differs as follows: three applications of carbendazim or three of flutriafol or without applications. The experimental lines with high yield, low notes to the symptoms and resistance to lodging, were selected and tested again in the 2005/2006 growing season. Genotypes with high severity and yield were considered tolerant to rust and the low severity and high yield ones as moderately resistant. Among the medium-cycle genotypes, there was moderate resistance to rust in one line and tolerance in five. Among the late-cycle genotypes, the six lines showed moderate resistance. The line USP 97-08135 is more tolerant to rust.


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