Microbial community structure and dynamics of starch-fed and glucose-fed chemostats during two years of continuous operation

2015 ◽  
Vol 10 (2) ◽  
pp. 368-380 ◽  
Author(s):  
Min Gou ◽  
Jing Zeng ◽  
Huizhong Wang ◽  
Yueqin Tang ◽  
Toru Shigematsu ◽  
...  
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Community Structure ◽  
Continuous Operation ◽  
Structure And Dynamics

Monitoring Microbial Community Structure and Dynamics duringin situU(VI) Bioremediation with a Field-Portable Microarray Analysis System

2010 ◽  
Vol 44 (14) ◽  
pp. 5516-5522 ◽  
Author(s):  
Darrell P. Chandler ◽  
Alexander Kukhtin ◽  
Rebecca Mokhiber ◽  
Christopher Knickerbocker ◽  
Dora Ogles ◽  
...  
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microarray Analysis ◽  
Microbial Community Structure ◽  
Structure And Dynamics ◽  
Analysis System

Microbial Community Structure and Dynamics in the Largest Natural French Lake (Lake Bourget)

2006 ◽  
Vol 52 (1) ◽  
pp. 72-89 ◽  
Author(s):  
J. Comte ◽  
S. Jacquet ◽  
S. Viboud ◽  
D. Fontvieille ◽  
A. Millery ◽  
...  
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Community Structure ◽  
Structure And Dynamics ◽  
Lake Bourget

scholarly journals Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics

2016 ◽  
Vol 6 (1) ◽  
Author(s):  
Luciana Principal Antunes ◽  
Layla Farage Martins ◽  
Roberta Verciano Pereira ◽  
Andrew Maltez Thomas ◽  
Deibs Barbosa ◽  
...  
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Community Structure ◽  
Structure And Dynamics

Microbial community structure and occurrence of diverse autotrophic ammonium oxidizing microorganisms in the anammox process

2010 ◽  
Vol 61 (11) ◽  
pp. 2723-2732 ◽  
Author(s):  
H. Bae ◽  
Y.-C. Chung ◽  
J.-Y. Jung
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Community Structure ◽  
Fragment Length Polymorphism ◽  
Amoa Gene ◽  
Continuous Operation ◽  
Anaerobic Sludge ◽  
Anammox Bacteria ◽  
Ammonia Oxidizing Bacteria ◽  
Anammox Process

The enrichment of anaerobic ammonium oxidizing (anammox) bacteria using an upflow anaerobic sludge bioreactor was successfully conducted for 400 days of continuous operation. The bacterial community structure of anammox bioreactor included Proteobacteria (42%), Chloroflexi (22%), Planctomycetes (20%), Chlorobi (7%), Bacteroidetes (5%), Acidobacteria (2%), and Actinobacteria (2%). All clones of Planctomycetes were affiliated with the anammox bacteria, Planctomycete KSU-1 (AB057453). The presence and diversity of ammonia oxidizing bacteria (AOB) and archaea (AOA) were identified by terminal restriction fragment length polymorphism (T-RFLP) based on the amoA gene sequences. The AOB in anammox bioreactor were affiliated with the Nitrosomonas europaea cluster. The T-RFLP result of AOA showed the diverse microbial community structure of AOA with three terminal restriction fragments (T-RFs).

scholarly journals Microbial Community Structure and Dynamics of Dark Fire-Cured Tobacco Fermentation

2006 ◽  
Vol 73 (3) ◽  
pp. 825-837 ◽  
Author(s):  
Michele Di Giacomo ◽  
Marianna Paolino ◽  
Daniele Silvestro ◽  
Giovanni Vigliotta ◽  
Francesco Imperi ◽  
...  
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Community Structure ◽  
Biochemical Characterization ◽  
Denaturing Gradient Gel Electrophoresis ◽  
Late Phase ◽  
Debaryomyces Hansenii ◽  
Nitrate Content ◽  
Structure And Dynamics ◽  
Ph Increase

ABSTRACT The Italian Toscano cigar production includes a fermentation step that starts when dark fire-cured tobacco leaves are moistened and mixed with ca. 20% prefermented tobacco to form a 500-kg bulk. The dynamics of the process, lasting ca. 18 days, has never been investigated in detail, and limited information is available on microbiota involved. Here we show that Toscano fermentation is invariably associated with the following: (i) an increase in temperature, pH, and total microbial population; (ii) a decrease in reducing sugars, citric and malic acids, and nitrate content; and (iii) an increase in oxalic acid, nitrite, and tobacco-specific nitrosamine content. The microbial community structure and dynamics were investigated by culture-based and culture-independent approaches, including denaturing gradient gel electrophoresis and single-strand conformational polymorphism. Results demonstrate that fermentation is assisted by a complex microbial community, changing in structure and composition during the process. During the early phase, the moderately acidic and mesophilic environment supports the rapid growth of a yeast population predominated by Debaryomyces hansenii. At this stage, Staphylococcaceae (Jeotgalicoccus and Staphylococcus) and Lactobacillales (Aerococcus, Lactobacillus, and Weissella) are the most commonly detected bacteria. When temperature and pH increase, endospore-forming low-G+C content gram-positive bacilli (Bacillus spp.) become evident. This leads to a further pH increase and promotes growth of moderately halotolerant and alkaliphilic Actinomycetales (Corynebacterium and Yania) during the late phase. To postulate a functional role for individual microbial species assisting the fermentation process, a preliminary physiological and biochemical characterization of representative isolates was performed.

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