Viscosity dependence of acrylamide quenching of ribonuclease T1 fluorescence. The gating mechanism

Author(s):  
Béla Somogyi ◽  
John A. Norman ◽  
Mária Punyiczki ◽  
Andreas Rosenberg
2020 ◽  
Author(s):  
Sam Verschooren ◽  
Yoav Kessler ◽  
Tobias Egner

An influential view of working memory (WM) holds that its’ contents are controlled by a selective gating mechanism that allows for relevant perceptual information to enter WM when opened, but shields WM contents from interference when closed. In support of this idea, prior studies using the reference-back paradigm have established behavioral costs for opening and closing the gate between perception and WM. WM also frequently requires input from long-term memory (LTM), but it is currently unknown whether a similar gate controls the selection of LTM representations into WM, and how WM gating of perceptual vs. LTM sources of information relate to each other. To address these key theoretical questions, we devised a novel version of the reference-back paradigm, where participants switched between gating perceptual and LTM information into WM. We observed clear evidence for gate opening and closing costs in both cases. Moreover, the pattern of costs associated with gating and source-switching indicated that perceptual and LTM information is gated into WM via a single gate, and rely on a shared source-selection mechanism. These findings extend current models of WM gating to encompass LTM information, and outline a new functional WM architecture.


2016 ◽  
Vol 11 (2) ◽  
pp. 218-225
Author(s):  
V.S. Kuleshov

The results of a numerical modeling of thermo-gravitational convection of abnormally thermo-viscous fluid in a closed square cavity with two vertical adiabatic walls and two horizontal isothermal walls are presented. A model Newtonian liquid for which the dependence of viscosity on temperature is described by a bell function (Gaussian curve) is considered. The natural convection of inhomogeneous liquid is described by the closed mathematical model based on the continuous mechanics equations written in Oberbeck-Boussinesq approximation, where the fluid density is a linear function of temperature. To simulate the fluid flow dynamics, the modified computer code based on the implicit finite volume method and SIMPLE-type algorithm with the second-order temporal accuracy is realized using multiprocessor technology. The effect of the viscosity abnormality on stationary modes of convective flows are studied, the integral heat transfer coefficients in a flat cell are calculated.


2021 ◽  
Vol 7 (1) ◽  
Author(s):  
Sensen Zhang ◽  
Baolei Yuan ◽  
Jordy Homing Lam ◽  
Jun Zhou ◽  
Xuan Zhou ◽  
...  

AbstractPannexin1 (PANX1) is a large-pore ATP efflux channel with a broad distribution, which allows the exchange of molecules and ions smaller than 1 kDa between the cytoplasm and extracellular space. In this study, we show that in human macrophages PANX1 expression is upregulated by diverse stimuli that promote pyroptosis, which is reminiscent of the previously reported lipopolysaccharide-induced upregulation of PANX1 during inflammasome activation. To further elucidate the function of PANX1, we propose the full-length human Pannexin1 (hPANX1) model through cryo-electron microscopy (cryo-EM) and molecular dynamics (MD) simulation studies, establishing hPANX1 as a homo-heptamer and revealing that both the N-termini and C-termini protrude deeply into the channel pore funnel. MD simulations also elucidate key energetic features governing the channel that lay a foundation to understand the channel gating mechanism. Structural analyses, functional characterizations, and computational studies support the current hPANX1-MD model, suggesting the potential role of hPANX1 in pyroptosis during immune responses.


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