scholarly journals AFM Studies of DNA Loops Secured by Lambda Repressor Proteins

2010 ◽  
Vol 98 (3) ◽  
pp. 662a
Author(s):  
Haowei Wang ◽  
Laura Finzi ◽  
Dale A.E. Lewis ◽  
David D. Dunlap
Genetics ◽  
1992 ◽  
Vol 130 (1) ◽  
pp. 17-26 ◽  
Author(s):  
N Benson ◽  
C Adams ◽  
P Youderian

Abstract The binding specificities of four mutant lambda cI repressor proteins with increased affinities for operator DNA were examined. Two mutant repressors (Glu34----Lys and Glu83----Lys) have the same specificity of binding as wild-type repressor, whereas two (Gly48----Ser and Gly48----Asn) have new binding specificities. The Gly48----Asn mutant repressor recognizes lambda operators with changes at base pair 3 with a different order of affinity than wild-type repressor, suggesting that the side chain of Asn48 makes additional specific DNA contacts at or near this base pair. When paired with a change that disrupts the specific interaction of the amino-terminal arm of lambda repressor with DNA (Lys4----Gln), one change that increases the affinity of repressor (Gly48----Ser) suppresses the binding defect of the Lys4----Gln repressor, resulting in a double mutant repressor with a new binding specificity different than that of both its parents and of wild type. These results lend strong support to the model of direct recognition of the lambda operator by lambda repressor proposed from the crystal structure of the repressor/operator complex.


Author(s):  
Biao Deng ◽  
Xuan Wang ◽  
Xing Long ◽  
Ren Fang ◽  
Shuangyun Zhou ◽  
...  

AbstractGibberellin (GA), auxin (IAA) and brassinosteroid (BR) are indispensable in the process of plant growth and development. Currently, research on the regulatory mechanism of phytohormones in banana dwarfism is mainly focused on GA, and few studies are focused on IAA and BR. In this study, we measured the contents of endogenous GA, IAA and BR and compared the transcriptomes of wild-type Williams banana and its dwarf mutant across five successive growth periods. We investigated the relationship between hormones and banana dwarfism and explored differential gene expression through transcriptome analysis, thus revealing the possible metabolic regulatory mechanism. We inferred a complex regulatory network of banana dwarfing. In terms of endogenous hormone levels, GA and IAA had significant effects on banana dwarfing, while BR had little effect. The key gene in GA biosynthesis of is GA2ox, and the key genes in IAA biosynthesis are TDC and YUCCA. The differential expression of these genes might be the main factor affecting hormone levels and plant height. In terms of hormone signal transduction, DELLA and AUX/IAA repressor proteins were the core regulators of GA and IAA, respectively. They inhibited the process of signal transduction and had feedback regulation on hormone levels. Finally, the transporter protein PIN, AUX1/LAX protein family and ABCB subfamily played supplementary roles in the transport of IAA. These results provide new insights into GA and IAA regulation of banana growth and a reliable foundation for the improvement of dwarf varieties.


Cell ◽  
1985 ◽  
Vol 42 (2) ◽  
pp. 549-558 ◽  
Author(s):  
Hillary C.M. Nelson ◽  
Robert T. Sauer

1994 ◽  
Vol 8 (10) ◽  
pp. 1212-1223 ◽  
Author(s):  
F W Whipple ◽  
N H Kuldell ◽  
L A Cheatham ◽  
A Hochschild

2012 ◽  
Vol 103 (8) ◽  
pp. 1753-1761 ◽  
Author(s):  
Carlo Manzo ◽  
Chiara Zurla ◽  
David D. Dunlap ◽  
Laura Finzi

2010 ◽  
Vol 98 (3) ◽  
pp. 617a
Author(s):  
Joshua Milstein ◽  
Yih-Fan Chen ◽  
Jens-Christian Meiners
Keyword(s):  

1975 ◽  
Vol 72 (3) ◽  
pp. 804-808 ◽  
Author(s):  
R. P. Dottin ◽  
L. S. Cutler ◽  
M. L. Pearson

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